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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Do021915.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium
|
| Family |
NAC |
| Protein Properties |
Length: 310aa MW: 33195.1 Da PI: 6.2372 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Do021915.1 | genome | Dichan | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 146.9 | 1e-45 | 15 | 152 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdL.pk...kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95
lppGfrF+Ptdeel+++yL++k+++ +++ +++evdiy++ePwdL p+ +e+ yfF++r+ k ++g r+nrat++gyWk+tgkdk+vl++
Do021915.1 15 LPPGFRFRPTDEELLTHYLAPKAADAGFTAPGAVREVDIYRAEPWDLlPAgggGGGGEDGGGYFFCRRSVKFPSGLRTNRATRAGYWKSTGKDKAVLRQ 113
79****************************999**************544333222244477************************************8 PP
NAM 96 ......kgelvglkktLvfykgrapkgektdWvmheyrl 128
+g g+kktLvfy+grap+g +t+Wvmheyrl
Do021915.1 114 qqhgrgGGDPAGVKKTLVFYRGRAPTGDRTNWVMHEYRL 152
6665555555***************************98 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 310 aa
Download sequence Send
to blast |
MGGDDGRLRA PAGPLPPGFR FRPTDEELLT HYLAPKAADA GFTAPGAVRE VDIYRAEPWD 60
LLPAGGGGGG GEDGGGYFFC RRSVKFPSGL RTNRATRAGY WKSTGKDKAV LRQQQHGRGG 120
GDPAGVKKTL VFYRGRAPTG DRTNWVMHEY RLAQGHGYTT SPVLATGAQS EWVICRMFMK 180
KPPGETSSQL EQEAVLHPPL GDHLQPSVDG CHRDGGGKTP APAAAASDSD HTSCFSDTAL 240
AMAQGGNGIE GMLPLNHEEL LMTNCSSVAD FALASSPKAT QLRDELAADS FDFLPQLLDY 300
EAFPFILQDF
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| 3D Structure ? help Back to Top |
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| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 3e-38 | 15 | 181 | 17 | 166 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 3e-38 | 15 | 181 | 17 | 166 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 3e-38 | 15 | 181 | 17 | 166 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 3e-38 | 15 | 181 | 17 | 166 | NO APICAL MERISTEM PROTEIN |
| 3swm_A | 3e-38 | 15 | 181 | 20 | 169 | NAC domain-containing protein 19 |
| 3swm_B | 3e-38 | 15 | 181 | 20 | 169 | NAC domain-containing protein 19 |
| 3swm_C | 3e-38 | 15 | 181 | 20 | 169 | NAC domain-containing protein 19 |
| 3swm_D | 3e-38 | 15 | 181 | 20 | 169 | NAC domain-containing protein 19 |
| 3swp_A | 3e-38 | 15 | 181 | 20 | 169 | NAC domain-containing protein 19 |
| 3swp_B | 3e-38 | 15 | 181 | 20 | 169 | NAC domain-containing protein 19 |
| 3swp_C | 3e-38 | 15 | 181 | 20 | 169 | NAC domain-containing protein 19 |
| 3swp_D | 3e-38 | 15 | 181 | 20 | 169 | NAC domain-containing protein 19 |
| 3ulx_A | 3e-38 | 15 | 185 | 15 | 173 | Stress-induced transcription factor NAC1 |
| 4dul_A | 3e-38 | 15 | 181 | 17 | 166 | NAC domain-containing protein 19 |
| 4dul_B | 3e-38 | 15 | 181 | 17 | 166 | NAC domain-containing protein 19 |
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