 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Do021446.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium
|
| Family |
NAC |
| Protein Properties |
Length: 287aa MW: 31974.8 Da PI: 7.0293 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Do021446.1 | genome | Dichan | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 164.3 | 4.2e-51 | 10 | 141 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk... 95
lppGfrF P+deelv++yL+ kv++++l + + evd++++ePw+Lp +k +++ewyfFs rd+kyatg r+nratksgyWkatgkd+ +++
Do021446.1 10 LPPGFRFYPSDEELVCHYLHSKVANERLAGAGGaMVEVDLHTHEPWELPDVAKLSTNEWYFFSFRDRKYATGLRTNRATKSGYWKATGKDRVIHNPkva 108
79*************************7765545***************87788999************************************998888 PP
NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrl 128
++++vg++ktLvfy+grap+g kt+Wvmhe+r+
Do021446.1 109 GRAVVGMRKTLVFYRGRAPNGIKTSWVMHEFRM 141
8889***************************98 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 287 aa
Download sequence Send
to blast |
MGLRDIELTL PPGFRFYPSD EELVCHYLHS KVANERLAGA GGAMVEVDLH THEPWELPDV 60
AKLSTNEWYF FSFRDRKYAT GLRTNRATKS GYWKATGKDR VIHNPKVAGR AVVGMRKTLV 120
FYRGRAPNGI KTSWVMHEFR MENPNTPPKE DWVLCRVFYK KKADAMDYAM DNEQDVAVPR 180
SADHPSYSPR FPALGSNHFH HLPPPSSDHH GALSDFPAMA LLHHQHNSIF DFHAQPHDGG 240
NVLAAAAAAA GSTDGSGAGD QCGSGVLIDL GLDEHYSNYS YNSLMQI
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 4e-48 | 1 | 165 | 4 | 169 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 4e-48 | 1 | 165 | 4 | 169 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 4e-48 | 1 | 165 | 4 | 169 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 4e-48 | 1 | 165 | 4 | 169 | NO APICAL MERISTEM PROTEIN |
| 3swm_A | 5e-48 | 1 | 165 | 7 | 172 | NAC domain-containing protein 19 |
| 3swm_B | 5e-48 | 1 | 165 | 7 | 172 | NAC domain-containing protein 19 |
| 3swm_C | 5e-48 | 1 | 165 | 7 | 172 | NAC domain-containing protein 19 |
| 3swm_D | 5e-48 | 1 | 165 | 7 | 172 | NAC domain-containing protein 19 |
| 3swp_A | 5e-48 | 1 | 165 | 7 | 172 | NAC domain-containing protein 19 |
| 3swp_B | 5e-48 | 1 | 165 | 7 | 172 | NAC domain-containing protein 19 |
| 3swp_C | 5e-48 | 1 | 165 | 7 | 172 | NAC domain-containing protein 19 |
| 3swp_D | 5e-48 | 1 | 165 | 7 | 172 | NAC domain-containing protein 19 |
| 4dul_A | 4e-48 | 1 | 165 | 4 | 169 | NAC domain-containing protein 19 |
| 4dul_B | 4e-48 | 1 | 165 | 4 | 169 | NAC domain-containing protein 19 |
| Search in ModeBase |
| Functional Description ? help
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| Source |
Description |
| UniProt | Binds to the promoter regions of genes involved in chlorophyll catabolic processes, such as NYC1, SGR1, SGR2 and PAO. {ECO:0000269|PubMed:27021284}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Repressed by the microRNA miR164. {ECO:0000269|PubMed:15294871, ECO:0000269|PubMed:17098808}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AK364002 | 1e-148 | AK364002.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2020L05. |
