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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Do020402.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium
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Family |
GeBP |
Protein Properties |
Length: 373aa MW: 39847.7 Da PI: 5.3002 |
Description |
GeBP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Do020402.1 | genome | Dichan | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | DUF573 | 103.3 | 1.9e-32 | 67 | 166 | 2 | 97 |
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgk..spsd.didafyefvkksisfkvsksqlveKirrLKkKfkkkvkk.aksgkepsfskehdqkifelskkiW 96
lfqrlw++eDeiv+L+++ +f+a++g+ +++ d++ fye ++++++ ++k+qlveKirrLK+K++++v++ + g ++f+++h+q ife+++ iW
Do020402.1 67 LFQRLWTDEDEIVILRAFAEFTAQRGTsfASHQyDTTPFYEDMRRRLHTGFTKNQLVEKIRRLKRKYRNCVERlRVAGAGFTFRSPHEQAIFEIARTIW 165
79*************************8867778***************************************88899********************* PP
DUF573 97 g 97
+
Do020402.1 166 R 166
8 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 373 aa
Download sequence Send
to blast |
MFPTVDDPSA AGAMVSSSFP DADAYGNGDS DDLDFPVDPN PNPVFSSPAA APASVSAAPA 60 AGERRPLFQR LWTDEDEIVI LRAFAEFTAQ RGTSFASHQY DTTPFYEDMR RRLHTGFTKN 120 QLVEKIRRLK RKYRNCVERL RVAGAGFTFR SPHEQAIFEI ARTIWRPDSD KHSRDSDDEG 180 GAAGNAHDAP FAIDAVAANG GESTKSPTSR PRRGRRRRTG DFPADAAPET LALPPAPMPL 240 MTEDALPAAF PQTAAMDGGV GVGGFSMDPA AGLPAALSAA AAATAVTGGA TAENPVLAAL 300 FKEMVRAMLS IGGGVSAAPL GLEPPPAIAG VPMEGEKWRQ QRIRELEVYL RRIDLLQDQA 360 RAALEELRSA PHT
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | BT064599 | 0.0 | BT064599.1 Zea mays full-length cDNA clone ZM_BFc0188M08 mRNA, complete cds. |
GenBank | EU972116 | 0.0 | EU972116.1 Zea mays clone 375368 hypothetical protein mRNA, complete cds. |
Best hit in Arabidopsis thaliana ? help
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Hit ID |
E-value |
Description |
AT3G04930.2 | 3e-32 | DNA-binding storekeeper protein-related transcriptional regulator |