 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Do019818.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium
|
| Family |
LBD |
| Protein Properties |
Length: 230aa MW: 23781.2 Da PI: 8.4945 |
| Description |
LBD family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Do019818.1 | genome | Dichan | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF260 | 119.6 | 1.8e-37 | 42 | 150 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyf.........paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleql 90
+C aCk+lrr+C+++Cv+apyf + + +++fa+vhk+FGasnv k+l+++p + r+da+s+++yeA+ar+ dPvyG+vg+il+lq+q++ +
Do019818.1 42 PCGACKFLRRRCVPGCVFAPYFgggsvrehgAGAGAAQFAAVHKVFGASNVAKMLSRVPVSLRRDAASTVCYEAQARIADPVYGCVGTILALQRQVALV 140
7*********************99998877444557*************************************************************** PP
DUF260 91 kaelallkee 100
+ael+++++e
Do019818.1 141 QAELSVAQTE 150
*****99875 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 230 aa
Download sequence Send
to blast |
MSRAMPPPGK RAGAASAVAA AGPAHAQAQA EEAVPAGGAG APCGACKFLR RRCVPGCVFA 60
PYFGGGSVRE HGAGAGAAQF AAVHKVFGAS NVAKMLSRVP VSLRRDAAST VCYEAQARIA 120
DPVYGCVGTI LALQRQVALV QAELSVAQTE FLNRRLALTT VNPAYSAASP TSQMVNCGSL 180
TQAVDFIDIE PAMRPLPPPL LPSQQLQREE EQQDGGSPTM DVFSHNVLGK
|
