 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Do018265.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium
|
| Family |
HD-ZIP |
| Protein Properties |
Length: 309aa MW: 33827.9 Da PI: 4.6527 |
| Description |
HD-ZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Do018265.1 | genome | Dichan | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 50.9 | 2.6e-16 | 64 | 114 | 6 | 56 |
S--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 6 tftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
++ eq+++Le++F +++++ ++++++A+ lgL+ rqV v FqNrRa++k
Do018265.1 64 RLALEQVRALERCFDTDNKLDPDRKARIARDLGLQPRQVAVXFQNRRARWK 114
57789*********************************************9 PP
|
| 2 | HD-ZIP_I/II | 115.7 | 2.8e-37 | 60 | 152 | 1 | 93 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93
e+krrl+ eqv++LE++F++++kL+p+rK+++ar+Lglqprqvav FqnrRAR+ktk lE+d++aL+++++al+++ ++L+++++ L++e++e
Do018265.1 60 ERKRRLALEQVRALERCFDTDNKLDPDRKARIARDLGLQPRQVAVXFQNRRARWKTKTLERDFAALRARHEALRADCDALRRDKDVLAAEIRE 152
69**************************************************************************************99986 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 309 aa
Download sequence Send
to blast |
MKRQSKRPAS SHDSTETGEK LAFAEDEALT ARNMEQDDVD DDEDELAGGR AARSACGLGE 60
RKRRLALEQV RALERCFDTD NKLDPDRKAR IARDLGLQPR QVAVXFQNRR ARWKTKTLER 120
DFAALRARHE ALRADCDALR RDKDVLAAEI RELRQKLSKP EVTAVKLEAA GNDAAEERQA 180
TVGASAAAVY KDGSSDSDSS AVFNDVETSP YSGAAFEQPA FLGFGAPPFL DTSAATTGCS 240
SLPLFETKWQ QGPTYPYDSY KTGGGYGITE EWLASSDVIG NDCAASFFSE EHASSLNFGW 300
CATGTEGWE
|
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Probable transcription factor. {ECO:0000250}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | JX469925 | 0.0 | JX469925.1 Zea mays subsp. mays clone UT3181 HB-type transcription factor mRNA, partial cds. |
