 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Do017994.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium
|
| Family |
G2-like |
| Protein Properties |
Length: 289aa MW: 30867.9 Da PI: 4.9714 |
| Description |
G2-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Do017994.1 | genome | Dichan | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | G2-like | 95.9 | 3e-30 | 23 | 76 | 2 | 55 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
+rlrWtp+LH+rFv av+qLGG++kAtPk++l++m v+ Ltl+++kSHLQkYRl
Do017994.1 23 TRLRWTPQLHNRFVLAVAQLGGADKATPKSVLRAMAVPQLTLYNLKSHLQKYRL 76
7****************************************************8 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 289 aa
Download sequence Send
to blast |
MSSSDGGGGG GGGQQQQGGE ARTRLRWTPQ LHNRFVLAVA QLGGADKATP KSVLRAMAVP 60
QLTLYNLKSH LQKYRLAVSR GLIANLPGDD GEGPNDRSSS SQSQTDEYDE DAAAKLRSAF 120
AADDGADTEE ALCDSPRSMA RMQREVQRKL QEQIEVQRHL QLRIEAQGRY LQSVLRRAQE 180
VLADHSLGSP AAKAELSELA SAVETGCLSS CSSLSPSPPR HRSADSCVTS SSSEAESQAA 240
AGSKRPCTCT VEQPVQQGKR TFVLQSHDAA EEADEEAEDG SSSEIDLNM
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 6j4r_A | 5e-17 | 22 | 77 | 1 | 56 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_B | 5e-17 | 22 | 77 | 1 | 56 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_C | 5e-17 | 22 | 77 | 1 | 56 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_D | 5e-17 | 22 | 77 | 1 | 56 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| Search in ModeBase |
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | FP095207 | 9e-71 | FP095207.1 Phyllostachys edulis cDNA clone: bphyem201h10, full insert sequence. |
