 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Do017688.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium
|
| Family |
G2-like |
| Protein Properties |
Length: 478aa MW: 51015 Da PI: 6.3948 |
| Description |
G2-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Do017688.1 | genome | Dichan | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | G2-like | 87.5 | 1.3e-27 | 184 | 238 | 1 | 56 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56
k +++WtpeLH+rFveaveqL G++kA+P++ile+m++++Lt+++++SHLQkYR++
Do017688.1 184 KVKVDWTPELHRRFVEAVEQL-GIDKAVPSRILEIMGIQCLTRHNIASHLQKYRSH 238
5689*****************.********************************86 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 478 aa
Download sequence Send
to blast |
MLEVSALRSP SKAADPRGFV GDHVGFPTSG SDCDDCFMVD DNLLLDYIDF SCDVPFFDAD 60
GDILPDLEVD PTELLAEFDG CSGAEAKAPD VKQEAGPEQE QRVTTTIEDD IEKRLLGKDE 120
KKGTNNKQNG DELQGSSAVT TEDDSGSGAG SSDSKSSASA SAGGHSKKKP SATAAGNNSN 180
GKRKVKVDWT PELHRRFVEA VEQLGIDKAV PSRILEIMGI QCLTRHNIAS HLQKYRSHRK 240
HLMAREAEAA TWAQKRQMYA AAAGSAGAPP RKLDAAAAAG PWVVPTIGFP PLPMAQPPPP 300
LCRPLHVWGH PPTTAAVEAA AAAAPAPTML PVWPRHLAPP RPLPPWAPMD PAYWHQQYNA 360
AARKWGPAAA LTQGTPCVAP QMPRFPVPGM VPHPMYRPTM MVPQPPPPPT TSSKLAELQL 420
QLDAHPSKES IDAAIGDVLV KPWLPLPLGL KPPSMDSVMS ELHKQGIPKV PPGQLASG
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcriptional activator that promotes chloroplast development. Acts as an activator of nuclear photosynthetic genes involved in chlorophyll biosynthesis, light harvesting, and electron transport (By similarity). {ECO:0000250}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: By light. {ECO:0000269|PubMed:11340194}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AF318579 | 1e-86 | AF318579.1 Zea mays putative transcription factor GOLDEN 2 mRNA, complete cds. |
| GenBank | BT062838 | 1e-86 | BT062838.1 Zea mays full-length cDNA clone ZM_BFb0374G22 mRNA, complete cds. |
| GenBank | EU953316 | 1e-86 | EU953316.1 Zea mays clone 1398500 transcription factor ZmGLK1 mRNA, complete cds. |
| GenBank | EU956792 | 1e-86 | EU956792.1 Zea mays clone 1574106 transcription factor ZmGLK1 mRNA, complete cds. |
| GenBank | KJ727689 | 1e-86 | KJ727689.1 Zea mays clone pUT5628 G2-like transcription factor (GLK13) mRNA, partial cds. |
