 |
Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Do017015.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium
|
| Family |
ERF |
| Protein Properties |
Length: 129aa MW: 13701.1 Da PI: 7.5263 |
| Description |
ERF family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Do017015.1 | genome | Dichan | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | AP2 | 66.2 | 6.4e-21 | 12 | 63 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
++y+GVr+++ +g+++AeIrdp + +r++lg+f+taeeAa+a+++a+ + +g
Do017015.1 12 TKYRGVRRRP-WGKFAAEIRDPERG--GARVWLGTFDTAEEAARAYDHAAFAQRG 63
69********.**********8333..4***********************9998 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 129 aa
Download sequence Send
to blast |
MEDGKDAGGT GTKYRGVRRR PWGKFAAEIR DPERGGARVW LGTFDTAEEA ARAYDHAAFA 60
QRGATAVLNF PGEIPGASSR GGGSSLSAAP PGGSSSRGRV RGDGEKIELE YLDDKILDDL 120
LDDGKYGRK
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AC025907 | 5e-52 | AC025907.2 Oryza sativa Japonica Group cultivar japonica chromosome 10 clone nbxb0094K20, complete sequence. |
| GenBank | AP014966 | 5e-52 | AP014966.1 Oryza sativa Japonica Group DNA, chromosome 10, cultivar: Nipponbare, complete sequence. |
| GenBank | CP012618 | 5e-52 | CP012618.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 10 sequence. |
