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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Do016190.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium
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Family |
ERF |
Protein Properties |
Length: 274aa MW: 29482.9 Da PI: 7.1826 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Do016190.1 | genome | Dichan | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 61.3 | 2.1e-19 | 115 | 166 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkklege 56
y+GVr+++ +g+++AeIrd + k +r++lg+f taeeAa a+++a+++++g+
Do016190.1 115 SYRGVRRRP-WGKFAAEIRDtRR---KGARVWLGTFATAEEAALAYDKAALRMRGP 166
69*******.**********332...34**************************95 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0010200 | Biological Process | response to chitin |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 274 aa
Download sequence Send
to blast |
MAIGAPGSHQ PNEAAANILE NVWATIMTGS TTPASSSTAA SSEVGEEKPE AILQRLPSLG 60 RWISMGAEEW DELLLSGTAI TSDASGELLI ASPASQEDRH DHHRASSSKA VACKSYRGVR 120 RRPWGKFAAE IRDTRRKGAR VWLGTFATAE EAALAYDKAA LRMRGPRAHL NFPLDVVQRE 180 LVAGAANGCG EATRVLRRKR RRGNNNAADD TRSHGSVSAA GGCDQNMVSF ASCAKKDQGA 240 SMVHERSIMS DPGAVIEFED IGSEYWDYLF SPLL
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KU685412 | 1e-176 | KU685412.1 Saccharum spontaneum clone SES23E05, complete sequence. |