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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Do014846.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium
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Family |
E2F/DP |
Protein Properties |
Length: 454aa MW: 48733.6 Da PI: 5.6488 |
Description |
E2F/DP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Do014846.1 | genome | Dichan | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | E2F_TDP | 57.8 | 1.8e-18 | 196 | 245 | 1 | 55 |
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLea 55
r+++sL llt+kf++ll+ +e+g+++ln++a++L +v ++RRiYDi+NVLea
Do014846.1 196 RYDSSLSLLTKKFINLLQGAEDGTLDLNKAAETL---EV--QKRRIYDITNVLEA 245
6899******************************...99..*************8 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005667 | Cellular Component | transcription factor complex |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 454 aa
Download sequence Send
to blast |
MDGGSSSLPL PHPPPQVYLC RPLPPPGPPV TAPPRVHLFR PPSPIPIFSS RPRAAASPPI 60 PPPPAAAPAP APAPAPPPQA AAAPAPPRPP PAAPGSIDKP PPRPPQPQAG SMLPPPAPKA 120 AGKGRPTPKA QPNEQNNGRE NSQAEINMGV TTFEPVKVIK RVKKIKVPKQ TVGTADGFGA 180 IEGVAGPSLS SLNHCRYDSS LSLLTKKFIN LLQGAEDGTL DLNKAAETLE VQKRRIYDIT 240 NVLEAAFLPI VFCKLPSNCM FVTTDGFDNL QEELEALYDE EFRLDDEIRL LYLLKEEINK 300 IPHFQGSTLI AINAPHGTCI EVPDPNADLY LYGHLGLQEK HYKIVLRSSM GPIDCYLISD 360 HQEILNPDQQ EAVDKLEPVV ATGSSQAVQQ MDCEPNQTPG KGQSNAVCTH TTKPSKKQEI 420 MSGILRIVPS DADADADYWL ASDVDVSMTD AWGT
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | BT064737 | 1e-80 | BT064737.1 Zea mays full-length cDNA clone ZM_BFb0090H09 mRNA, complete cds. |
GenBank | EU971499 | 1e-80 | EU971499.1 Zea mays clone 366261 E2F-related protein mRNA, complete cds. |
GenBank | KJ726878 | 1e-80 | KJ726878.1 Zea mays clone pUT3419 E2F-DP transcription factor (E2F5) mRNA, partial cds. |