 |
Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Do013977.1 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium
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Family |
LBD |
Protein Properties |
Length: 231aa MW: 25039.2 Da PI: 6.5841 |
Description |
LBD family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Do013977.1 | genome | Dichan | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | DUF260 | 129.8 | 1.2e-40 | 58 | 157 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99
+CaaCk+lrr+Ca++Cvlapyfp ++p+kf +h++FGasn++kll++lpe+ r da+ss+vyeAear+rdPvyG++g + +lq+q ++lk++la++++
Do013977.1 58 PCAACKILRRRCADGCVLAPYFPPTEPAKFTTTHRVFGASNIIKLLQELPESSRADAVSSMVYEAEARLRDPVYGCAGAVCRLQKQANELKVQLARAQA 156
7**********************************************************************************************9987 PP
DUF260 100 e 100
Do013977.1 157 D 157
5 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 231 aa
Download sequence Send
to blast |
MDYGNGSTAG TTTAPQQQQY SCPFVSPPSR VSSCSPPPPP PPAVQVVGNV PPTVVLSPCA 60 ACKILRRRCA DGCVLAPYFP PTEPAKFTTT HRVFGASNII KLLQELPESS RADAVSSMVY 120 EAEARLRDPV YGCAGAVCRL QKQANELKVQ LARAQADLLN AQAQHANLLA LVCVEVANHR 180 DSHHHQQQQH HNQSPLMDGG RDLGAAAYQM FYDSDDLDSA TWPDHEAQLW T
|
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | EU953937 | 0.0 | EU953937.1 Zea mays clone 1449845 LOB domain protein 11 mRNA, complete cds. |