 |
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Do013917.1 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium
|
Family |
TCP |
Protein Properties |
Length: 293aa MW: 30679.5 Da PI: 8.7295 |
Description |
TCP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Do013917.1 | genome | Dichan | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | TCP | 94.3 | 2.5e-29 | 58 | 131 | 3 | 74 |
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec..e 74
g+kdrhsk+ T +g+RdRRvRls+++a++++dLqd+LG+ ++sk ++WLl +a+++i++l+ ++++++ +
Do013917.1 58 GGKDRHSKVRTVKGLRDRRVRLSVPTAIQLYDLQDRLGLSQPSKVVDWLLDAAQHEIDKLPPLQFPPQAQDlvA 131
78*************************************************************99999222221 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 293 aa
Download sequence Send
to blast |
MISGNLTNEE LAARCTKAEP AAGAAAGAVV AAKNPVPSSR HWPPSTESRI VRVSRVFGGK 60 DRHSKVRTVK GLRDRRVRLS VPTAIQLYDL QDRLGLSQPS KVVDWLLDAA QHEIDKLPPL 120 QFPPQAQDLV AHLPSSMVAP FANGAADRAA AAAANAATGA SAAMGDGDKR HCHGGGIKGL 180 MGLNNSVGLV NGAMPLAHGL YYTAGEPWTN GNVVHDQVSH QGTSPQTVAH HSPFSSLLSL 240 APGPQLVFYS PEGGGFAMKE AADHQFPVDN LDHSQGQLSL SSARSFLHPG SQG
|
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | EU956358 | 0.0 | EU956358.1 Zea mays clone 1561243 TCP family transcription factor containing protein mRNA, complete cds. |
Best hit in Arabidopsis thaliana ? help
Back to Top |
Hit ID |
E-value |
Description |
AT5G60970.1 | 5e-41 | TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 5 |