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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Do012810.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium
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Family |
Trihelix |
Protein Properties |
Length: 337aa MW: 36324.8 Da PI: 10.4065 |
Description |
Trihelix family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Do012810.1 | genome | Dichan | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | trihelix | 47.5 | 4.8e-15 | 36 | 122 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.......rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86
+W++ e+ aL++a ++ +l+rg+l++++W+ev++++ +r r+ +qCk++ + l+k+yk+++++++ s +++f++l+
Do012810.1 36 CWSDGETTALVNAWGSRYVELNRGNLRQKQWQEVADAVnsrggpsVRRRPPRTDVQCKNRVDTLKKKYKAERARNSP------SGWSFFHELD 122
7*************************************9999999888889***********************997......47******98 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 337 aa
Download sequence Send
to blast |
MEVREMALAA AAAAAVGGGG GKLPPPNPNL PYREDCWSDG ETTALVNAWG SRYVELNRGN 60 LRQKQWQEVA DAVNSRGGPS VRRRPPRTDV QCKNRVDTLK KKYKAERARN SPSGWSFFHE 120 LDRLVGPTLS ASASKRPSPS APQFALPFHP PAVRNHPTPS PSPPPPMALP LPNYNRRSPL 180 PAAALIHQAA AAAAAPVSDS EDSDDAGANN NHNSQRSPSH SLSSLSGNNK KRSRDESGSG 240 GDKGFGELAR AIEAFAEMYE RVESAKQKHA LEMERQRIEF LKQLEVKRME NFADAHVKLA 300 RAKRPKKTTG GAADGAGAME LVATVASLPF VSTSTFL
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Best hit in Arabidopsis thaliana ? help
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Hit ID |
E-value |
Description |
AT3G58630.1 | 9e-30 | sequence-specific DNA binding transcription factors |