 |
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Do012440.1 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium
|
Family |
WOX |
Protein Properties |
Length: 340aa MW: 36546.1 Da PI: 9.7069 |
Description |
WOX family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Do012440.1 | genome | Dichan | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Homeobox | 66.5 | 3.5e-21 | 40 | 99 | 3 | 57 |
--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
Homeobox 3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
R+++tkeql +Le+l+e r+psae++++++++l +++ ++V++WFqN++a++++
Do012440.1 40 ARWNPTKEQLAVLERLYEHgMRTPSAEQIKQITARLrehgHIEGKNVFYWFQNHKARQRQ 99
7*****************99**************************************96 PP
|
2 | Wus_type_Homeobox | 114.5 | 5.4e-37 | 39 | 101 | 3 | 65 |
Wus_type_Homeobox 3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65
++RW+Pt+eQ+ +Le+ly++G+rtP++e+i++ita+L+e+G+ie+kNVfyWFQN+kaR+rqkq
Do012440.1 39 NARWNPTKEQLAVLERLYEHGMRTPSAEQIKQITARLREHGHIEGKNVFYWFQNHKARQRQKQ 101
78***********************************************************97 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0008284 | Biological Process | positive regulation of cell proliferation |
GO:0009942 | Biological Process | longitudinal axis specification |
GO:0010654 | Biological Process | apical cell fate commitment |
GO:0048825 | Biological Process | cotyledon development |
GO:0080167 | Biological Process | response to karrikin |
GO:0090451 | Biological Process | cotyledon boundary formation |
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 340 aa
Download sequence Send
to blast |
MEAPQQGSSV VIDLESSGGG APVSPPLSPA SAAAAALANA RWNPTKEQLA VLERLYEHGM 60 RTPSAEQIKQ ITARLREHGH IEGKNVFYWF QNHKARQRQK QKQESFAYFT RLLRRPPPLP 120 MLFRPPGQPY PHGAGRLPVP AAPAAAPVMA TMAPPPSPVG SSRNNNGGTH VMYNRAPFYM 180 AAPQGPAANA YYHHMQQQQQ HQQQTAVMYP RMEIAQDKMI PAVAQQHQHQ HHQAGAMYQA 240 AAAPPPNSAS STPLHVVQHF PAPGADAGPS RRETLQLFPL QPSYLLPDKG LAAAAAGGAH 300 LASASASFSG ESEGPASPDN NDEAPALPFY DFFGLQSGGR
|
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | AM490235 | 1e-119 | AM490235.1 Zea mays mRNA for putative wuschel homeobox protein (wox2A gene). |
GenBank | BT037009 | 1e-119 | BT037009.1 Zea mays full-length cDNA clone ZM_BFb0151I01 mRNA, complete cds. |
GenBank | EU954062 | 1e-119 | EU954062.1 Zea mays clone 1453569 homeobox domain containing protein mRNA, complete cds. |
GenBank | KJ728384 | 1e-119 | KJ728384.1 Zea mays clone pUT6667 HB transcription factor (HB94) mRNA, partial cds. |