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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Do012422.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium
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Family |
Trihelix |
Protein Properties |
Length: 305aa MW: 34630.6 Da PI: 9.6922 |
Description |
Trihelix family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Do012422.1 | genome | Dichan | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | trihelix | 66.7 | 4.6e-21 | 85 | 181 | 1 | 84 |
trihelix 1 rWtkqevlaLiearremeerlrrgk............lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr.tsessstcpyfdq 84
+Wt ++v++L+ a++++++++ ++ ++k++W+ vs++m ergf +sp+qC++k+++lnkryk+++e+ +++ +++ +++ ++++q
Do012422.1 85 KWTSNMVKLLVSAVSYIDDDIDADHgtssgrrkhamlKRKGKWRLVSSAMTERGFFVSPQQCEDKFNDLNKRYKRLTEILGRGrACQIVEKPALLEQ 181
7**************999999987555677888999899*****************************************99956888888877776 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 305 aa
Download sequence Send
to blast |
MEGNLTPRAL IPGGAPFDLG QPFHFAAQPQ VVQVHQGAFA SPAANQMEGL GSVVKASLSS 60 EEDADDGHHG HGKAAASASQ WHRVKWTSNM VKLLVSAVSY IDDDIDADHG TSSGRRKHAM 120 LKRKGKWRLV SSAMTERGFF VSPQQCEDKF NDLNKRYKRL TEILGRGRAC QIVEKPALLE 180 QVSLSGKLKE EAKKHLSSKH LHYEEMCSYH NHNRQCLLDD PVLQTSEKNP SGMTAIQIER 240 ERLKIKGEML KLEQNHLKWL RSSKEQDREL QKMKLENERM ELKNEQLELK LRLKEIEMGI 300 KPKRI
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