 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Do012345.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium
|
| Family |
MYB_related |
| Protein Properties |
Length: 340aa MW: 36450.8 Da PI: 4.4425 |
| Description |
MYB_related family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Do012345.1 | genome | Dichan | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Myb_DNA-binding | 51.3 | 2.6e-16 | 16 | 84 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT......................-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg......................tWktIartmgkgRtlkqcksrwqkyl 48
+g+WT+eEd +l+ +++++G +W++Ia++++ gRt++++k+ w+++l
Do012345.1 16 KGSWTPEEDMRLIAYIQKYGHAnwralpkqagtfaspssieflsRWSKIAACLP-GRTDNEIKNVWNTHL 84
799*****************99********************************.************986 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 340 aa
Download sequence Send
to blast |
MRKGRAPCCA KVGLNKGSWT PEEDMRLIAY IQKYGHANWR ALPKQAGTFA SPSSIEFLSR 60
WSKIAACLPG RTDNEIKNVW NTHLKKRVSP PGGEERGAGS KKKKKAAAAA AEVPVVPSPS 120
PSSSTTTTAN CSSGDSGEQQ SDASKEHDEL GLEELKMIPT LDDPGFDFNM LVDMMVDAVP 180
ELYCPAVSVP TSPCASSTSP PAPARPSVDE LLDLPEIDID HELWSIIDGD GADAVAAETP 240
AEPCQQQSNA TEPNAARTTS HGAEGKEWWL EDLEKELGLW GPMEDFYYPM GPQGPLAHPD 300
PLPGMVDDPV SCYFQAGPTP AMLHDPGYSA VVTSSNQMGF
|
| Nucleic Localization
Signal ? help
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 |
| No. |
Start |
End |
Sequence |
| 1 | 84 | 104 | KKRVSPPGGEERGAGSKKKKK |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AF470064 | 1e-64 | AF470064.1 Sorghum bicolor P-type R2R3 Myb protein (Myb6) gene, partial cds. |
