 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Do012072.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium
|
| Family |
CPP |
| Protein Properties |
Length: 360aa MW: 39985.3 Da PI: 7.9755 |
| Description |
CPP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Do012072.1 | genome | Dichan | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | TCR | 43.9 | 4.9e-14 | 68 | 105 | 3 | 40 |
TCR 3 kkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40
+k+C Ckks+Clk+YC Cfa g +Cse+C C+ C+Nk+
Do012072.1 68 CKHCACKKSRCLKLYCPCFAGGGYCSEKCGCQPCFNKD 105
89**********************************97 PP
|
| 2 | TCR | 50.3 | 4.8e-16 | 153 | 189 | 3 | 39 |
TCR 3 kkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39
++gCnCkks+ClkkYC+C+++g+ Cs C+C+dC+N
Do012072.1 153 RRGCNCKKSSCLKKYCDCYQDGTGCSLFCRCDDCQNP 189
589*********************************6 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 360 aa
Download sequence Send
to blast |
MEATPISVKP PSPVPAAPPP AAMEPMDLPT HAAGATEVEP CSMNQLAVAV TPDPKRQKVE 60
EAADGNGCKH CACKKSRCLK LYCPCFAGGG YCSEKCGCQP CFNKDAYAET VQTTRKVLLS 120
RQKRMSLKIN RRSEANAEPM EDAHHSSSST PPRRGCNCKK SSCLKKYCDC YQDGTGCSLF 180
CRCDDCQNPF GKNEGIMAED SKRYLYTGAD LDHSEGEHEF IVERSPRLQS PISKESSFHQ 240
TPPHLRASSR DIHVFPQAMS QWQALPRSWH CSNKRNSNDR GMDDSANYKN SNNDWQLSKP 300
EDSYSISKCV QIMNGMVELS QVEKSVAPDV FLLPGNREIF ISLGGDVRAL WLKRKIQHLS
|
| Best hit in Arabidopsis thaliana ? help
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| Hit ID |
E-value |
Description |
| AT3G22760.1 | 2e-44 | Tesmin/TSO1-like CXC domain-containing protein |
