PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium

Family

G2-like

Protein Properties

Length: 346aa MW: 37694.6 Da PI: 5.6532

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Do011605.1	genome	Dichan	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	81.7	8.3e-26	213	266	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 r+rWt e+H+rF +av+qLGG e+A Pk+ile+m+v+gLt+++vkSHLQ +R+ Do011605.1 213 VRRRWTREMHDRFRDAVNQLGGGENAKPKAILEIMNVEGLTRDQVKSHLQIHRS 266 69*************************************************996 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51294	12.885	209	269	IPR017930	Myb domain
SuperFamily	SSF46689	3.58E-16	211	270	IPR009057	Homeodomain-like
Gene3D	G3DSA:1.10.10.60	4.6E-25	211	269	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	2.9E-21	213	266	IPR006447	Myb domain, plants
Pfam	PF00249	5.6E-7	214	262	IPR001005	SANT/Myb domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 346 aa Download sequence Send to blast
MGPRAPPPRP RSSRKHGTPR YDFDDETERS WSFAASMPSS SSTLPMVIAQ RRFPNLASSI 60 VHSLNAEILS SDPISYSGVS QQPLGGNHPG LPAEATRSAD PLGGLLNNNG IDSVEKQPDS 120 GSVRDPNESD ERDEWLTCLV NGDLDDIITA DITSDYPQMD GSAPVSSSLN SETWPHEHIV 180 HQLISVPTIP EQLHPTVSPP ATINFHSPQR TRVRRRWTRE MHDRFRDAVN QLGGGENAKP 240 KAILEIMNVE GLTRDQVKSH LQIHRSILEN HVMSLHELED RQNLNTDRRT VHLPPSPPPP 300 PPPAPPFSSS VNGGSRMMHG EGSSTAALDD DGHASEAGSL GNNEGA

Sequence ? help Back to Top

Protein Sequence Length: 346 aa Download sequence Send to blast

MGPRAPPPRP RSSRKHGTPR YDFDDETERS WSFAASMPSS SSTLPMVIAQ RRFPNLASSI  60
VHSLNAEILS SDPISYSGVS QQPLGGNHPG LPAEATRSAD PLGGLLNNNG IDSVEKQPDS  120
GSVRDPNESD ERDEWLTCLV NGDLDDIITA DITSDYPQMD GSAPVSSSLN SETWPHEHIV  180
HQLISVPTIP EQLHPTVSPP ATINFHSPQR TRVRRRWTRE MHDRFRDAVN QLGGGENAKP  240
KAILEIMNVE GLTRDQVKSH LQIHRSILEN HVMSLHELED RQNLNTDRRT VHLPPSPPPP  300
PPPAPPFSSS VNGGSRMMHG EGSSTAALDD DGHASEAGSL GNNEGA

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
6j4r_A	1e-14	212	266	1	55	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B	1e-14	212	266	1	55	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C	1e-14	212	266	1	55	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D	1e-14	212	266	1	55	Protein PHOSPHATE STARVATION RESPONSE 1

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Do011605.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_025825635.1	1e-120	protein PHOSPHATE STARVATION RESPONSE 2-like isoform X1
TrEMBL	A0A1E5VR27	0.0	A0A1E5VR27_9POAL; Uncharacterized protein
STRING	Pavir.J07757.1.p	1e-115	(Panicum virgatum)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP16835	9	11

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G28610.1	2e-11	phosphate starvation response 1