PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Do011605.1
Organism
Dichanthelium oligosanthes
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium
Family G2-like
Protein Properties Length: 346aa    MW: 37694.6 Da    PI: 5.6532
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Do011605.1genomeDichanView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like81.78.3e-26213266255
     G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                  r+rWt e+H+rF +av+qLGG e+A Pk+ile+m+v+gLt+++vkSHLQ +R+
  Do011605.1 213 VRRRWTREMHDRFRDAVNQLGGGENAKPKAILEIMNVEGLTRDQVKSHLQIHRS 266
                 69*************************************************996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129412.885209269IPR017930Myb domain
SuperFamilySSF466893.58E-16211270IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.604.6E-25211269IPR009057Homeodomain-like
TIGRFAMsTIGR015572.9E-21213266IPR006447Myb domain, plants
PfamPF002495.6E-7214262IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 346 aa     Download sequence    Send to blast
MGPRAPPPRP RSSRKHGTPR YDFDDETERS WSFAASMPSS SSTLPMVIAQ RRFPNLASSI  60
VHSLNAEILS SDPISYSGVS QQPLGGNHPG LPAEATRSAD PLGGLLNNNG IDSVEKQPDS  120
GSVRDPNESD ERDEWLTCLV NGDLDDIITA DITSDYPQMD GSAPVSSSLN SETWPHEHIV  180
HQLISVPTIP EQLHPTVSPP ATINFHSPQR TRVRRRWTRE MHDRFRDAVN QLGGGENAKP  240
KAILEIMNVE GLTRDQVKSH LQIHRSILEN HVMSLHELED RQNLNTDRRT VHLPPSPPPP  300
PPPAPPFSSS VNGGSRMMHG EGSSTAALDD DGHASEAGSL GNNEGA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4r_A1e-14212266155Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B1e-14212266155Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C1e-14212266155Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D1e-14212266155Protein PHOSPHATE STARVATION RESPONSE 1
Cis-element ? help Back to Top
SourceLink
PlantRegMapDo011605.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025825635.11e-120protein PHOSPHATE STARVATION RESPONSE 2-like isoform X1
TrEMBLA0A1E5VR270.0A0A1E5VR27_9POAL; Uncharacterized protein
STRINGPavir.J07757.1.p1e-115(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP16835911
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G28610.12e-11phosphate starvation response 1