 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Do010700.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium
|
| Family |
MYB_related |
| Protein Properties |
Length: 340aa MW: 37738.3 Da PI: 9.4705 |
| Description |
MYB_related family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Do010700.1 | genome | Dichan | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Myb_DNA-binding | 42.4 | 1.7e-13 | 41 | 85 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
r +WT++E++++++a +++ + Wk+I + +g +t q++s+ qky
Do010700.1 41 RESWTEQEHDKFLEALQLFDRD-WKKIEAFVG-SKTVIQIRSHAQKY 85
789*****************77.*********.*************9 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 340 aa
Download sequence Send
to blast |
MVSASTPPVP PPPPQPQSDA AGSGEDASKK VRKPYTITKS RESWTEQEHD KFLEALQLFD 60
RDWKKIEAFV GSKTVIQIRS HAQKYFLKVQ KNGTSEHVPP PRPKRKAAHP YPQKASKNEP 120
NYGLKTDSSS IHRNSGMNAT VSSWAVSSIP PAVASSMVKE DLGPGTMAPN NFCSSSSEGP 180
PRTWQPGEAN DQINQVPSLR RQYLMIFLLI ILQCKIINQI LSTSTIPKTY VLIILPVHLF 240
FFLGSVFDPS TSGHLQKLKE MNPIDVETAL LLMRNLSINL TSPDFEDQDA ISVLLNWKKE 300
LSFILCILMQ RKLLSSYSTS DGLELESSRS SALATSAPFM
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | HF679446 | 0.0 | HF679446.1 Saccharum hybrid cultivar Co 86032 mRNA for ScMYB40 protein. |
