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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Do008744.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium
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Family |
GeBP |
Protein Properties |
Length: 399aa MW: 42377.2 Da PI: 4.7098 |
Description |
GeBP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Do008744.1 | genome | Dichan | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | DUF573 | 94 | 1.5e-29 | 83 | 182 | 2 | 97 |
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgk..spsd.didafyefvkksisfkvsksqlveKirrLKkKfkkkvkk.aksgkepsfskehdqkifelskkiW 96
lfqrlw+ee e+++L+G+ +f+a++g+ +++ d+ fye +++++sf+++ksql+eK+rrLKkK++ ++ a++g ++f+++h+ i+++++ iW
Do008744.1 83 LFQRLWTEEEELLILRGFHEFTARRGTtfASHQyDTGPFYEEIRRRLSFDFTKSQLIEKLRRLKKKYRVSAARvAAQGAAFAFRSAHEGAIYDVARHIW 181
79************************99877778***********************************9999889*********************** PP
DUF573 97 g 97
+
Do008744.1 182 R 182
8 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 399 aa
Download sequence Send
to blast |
MADDDDPLTA AASSSAGDDD DEGTDTDASN SDLANHRDPP PPLTDATSAP PPPAASAAEP 60 TGAVPPPPPQ PQTQPQGEDS RRLFQRLWTE EEELLILRGF HEFTARRGTT FASHQYDTGP 120 FYEEIRRRLS FDFTKSQLIE KLRRLKKKYR VSAARVAAQG AAFAFRSAHE GAIYDVARHI 180 WRPAFRRRDG AGGPADASDE DDINPAAAAA AAAALPNATE DGGGGSASAP TPRGRGGRRV 240 RRRTAQELEA PALPATSALM LNDVVQEPLL VSVDNLAPAF APPPPVQVPV VSPMPATPSP 300 MPVTASGATE EVVRTILSPL LREFIGSVAV AGQTGLGLGM ELGSIGGFDV FGPGPNPGVP 360 GGEKWRQQQI LELEVYLKRI ELIREQVTAT LQELRSSEG
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | BT065406 | 1e-157 | BT065406.1 Zea mays full-length cDNA clone ZM_BFb0145O21 mRNA, complete cds. |
GenBank | JX428457 | 1e-157 | JX428457.1 Zea mays subsp. mays clone pUT3052 GBP21 GeBP type transcription factor mRNA, partial cds. |
Best hit in Arabidopsis thaliana ? help
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Hit ID |
E-value |
Description |
AT3G04930.2 | 5e-26 | DNA-binding storekeeper protein-related transcriptional regulator |