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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Do007954.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium
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Family |
ERF |
Protein Properties |
Length: 230aa MW: 24363 Da PI: 5.7048 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Do007954.1 | genome | Dichan | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 58.5 | 1.6e-18 | 61 | 111 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
+ ykGVr++ grWv+e+r+p g ++r++lg+f tae+Aa+a++ a+++l+g
Do007954.1 61 PVYKGVRRRN-PGRWVCEVREP--HG-KQRIWLGTFETAEMAARAHDVAALALRG 111
68*****887.9******9996..33.5*************************98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 230 aa
Download sequence Send
to blast |
MDVGAFSSDY SSSGTPSPVG RGGGADGDDA GAGSSSSYMT VSSAPPKRRA GRTKFKETRH 60 PVYKGVRRRN PGRWVCEVRE PHGKQRIWLG TFETAEMAAR AHDVAALALR GRAACLNFAD 120 SPRLLRVPPM GAGHDEIRRA AAVAAEQFRP PPDQSNGAAG EVAAAPPEAV PSATQNIDDP 180 YCIIDDRLDF GMQGYLDMAQ GMLIDPPPMA GSSTSGGDDD DNGEVKLWSY
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Functional Description ? help
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Source |
Description |
UniProt | Transcriptional activator that binds specifically to the DNA sequence 5'-[AG]CCGAC-3'. Binding to the C-repeat/DRE element mediates high salinity- and dehydration-inducible transcription (By similarity). {ECO:0000250}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | EU968562 | 0.0 | EU968562.1 Zea mays clone 322305 dehydration-responsive element-binding protein 1A mRNA, complete cds. |
Publications
? help Back to Top |
- Kikuchi S, et al.
Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Science, 2003. 301(5631): p. 376-9 [PMID:12869764] - Chen JQ,Meng XP,Zhang Y,Xia M,Wang XP
Over-expression of OsDREB genes lead to enhanced drought tolerance in rice. Biotechnol. Lett., 2008. 30(12): p. 2191-8 [PMID:18779926]
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