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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Do007823.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium
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Family |
M-type_MADS |
Protein Properties |
Length: 190aa MW: 21055.1 Da PI: 10.8912 |
Description |
M-type_MADS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Do007823.1 | genome | Dichan | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | SRF-TF | 64.7 | 1e-20 | 21 | 68 | 2 | 49 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS
SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49
+i++ +r vtfskR+ g+l KA+ELS LC+a+vavi+fs g+ +e+
Do007823.1 21 FIKDPARRMVTFSKRKSGLLNKASELSLLCGARVAVIVFSAAGRPFEF 68
799****************************************99988 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 190 aa
Download sequence Send
to blast |
MVAPRGTGRT SQGRKRIDIA FIKDPARRMV TFSKRKSGLL NKASELSLLC GARVAVIVFS 60 AAGRPFEFGS PSLDHVLRRF APLPAGDEDG LGFPDDAIYG DEREAVEVTA RRVKEVKARV 120 AEEESRMAAV GKKVLGASAG RVWWEADVEA LGEEELREFA RALRRLRDNV RRHADKLMLT 180 PASQPTTRRQ
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1tqe_P | 4e-17 | 13 | 81 | 2 | 70 | Myocyte-specific enhancer factor 2B |
1tqe_Q | 4e-17 | 13 | 81 | 2 | 70 | Myocyte-specific enhancer factor 2B |
1tqe_R | 4e-17 | 13 | 81 | 2 | 70 | Myocyte-specific enhancer factor 2B |
1tqe_S | 4e-17 | 13 | 81 | 2 | 70 | Myocyte-specific enhancer factor 2B |
6c9l_A | 4e-17 | 13 | 81 | 2 | 70 | Myocyte-specific enhancer factor 2B |
6c9l_B | 4e-17 | 13 | 81 | 2 | 70 | Myocyte-specific enhancer factor 2B |
6c9l_C | 4e-17 | 13 | 81 | 2 | 70 | Myocyte-specific enhancer factor 2B |
6c9l_D | 4e-17 | 13 | 81 | 2 | 70 | Myocyte-specific enhancer factor 2B |
6c9l_E | 4e-17 | 13 | 81 | 2 | 70 | Myocyte-specific enhancer factor 2B |
6c9l_F | 4e-17 | 13 | 81 | 2 | 70 | Myocyte-specific enhancer factor 2B |
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