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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Do007136.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium
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Family |
TCP |
Protein Properties |
Length: 295aa MW: 30768.6 Da PI: 7.9921 |
Description |
TCP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Do007136.1 | genome | Dichan | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | TCP | 103.9 | 2.7e-32 | 37 | 152 | 1 | 104 |
TCP 1 aagkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt...........ssssaseceaesssssasnsssg 88
aag+kdrhsk+ T++g+RdRRvRls+++a++f+d+qd+LG+d++sk+i WL+++a +ai+ l+++ ss++a + +++++s++++s+s+
Do007136.1 37 AAGGKDRHSKVVTARGLRDRRVRLSVPTAIQFYDIQDRLGVDQPSKAIAWLIRAAGAAIDGLPSLdcsfalpvgaaSSPPA--AGDDAEVSTSETSKSS 133
6899*************************************************************9999998876533333..2222222222222222 PP
TCP 89 ..........kaaksaakskksqksa 104
+aa++a ++a
Do007136.1 134 vlslsnapadNAATAA-------HQA 152
3333222222111111.......111 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 295 aa
Download sequence Send
to blast |
MEEVGMERTA CKRPRAALEG GSAAAAAWRT CRVARAAAGG KDRHSKVVTA RGLRDRRVRL 60 SVPTAIQFYD IQDRLGVDQP SKAIAWLIRA AGAAIDGLPS LDCSFALPVG AASSPPAAGD 120 DAEVSTSETS KSSVLSLSNA PADNAATAAH QANHAYNGNA SGGAAFPELL HCSASDSKPM 180 QQQPTLAYYA AQLPSSHAAP AMPFETMPQL AFIQEQPHTA VGFDRGTLQS NAAVAAPLWP 240 PSQQAFLLQR FATAPADANG LPFFLGGSAA AAAAPLTVNA EPRLQLWDFK QERKA
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Functional Description ? help
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Source |
Description |
UniProt | Transcription activator. Binds the promoter core sequence 5'-GGNCC-3'. {ECO:0000269|PubMed:12000681}. |