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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Do006900.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium
|
| Family |
NAC |
| Protein Properties |
Length: 300aa MW: 32537.2 Da PI: 6.1642 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Do006900.1 | genome | Dichan | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 134.4 | 7.5e-42 | 20 | 152 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk...kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95
lppG+rF Pt+eel+++yL+++++g++ e+ ++i+ vdiy+++P++L++ +++ ++++w+fF++r++++ +g r+ r+t sgyWkatg+ v+s+
Do006900.1 20 LPPGYRFYPTEEELLTFYLRHRLAGTRPEVGQFIPVVDIYSFHPSQLQAlagAANVgDTEQWFFFCPRAERELHGGRPARTTPSGYWKATGSPSYVYSA 118
79****************************999**************95455333335569************************************98 PP
NAM 96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128
++++g k+t+vfy+grap+g+kt+W m+ey++
Do006900.1 119 sANRVIGEKRTMVFYEGRAPTGSKTRWKMNEYKA 152
77788***************************85 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 300 aa
Download sequence Send
to blast |
MLLQRTMTME SGGGGGDPLL PPGYRFYPTE EELLTFYLRH RLAGTRPEVG QFIPVVDIYS 60
FHPSQLQALA GAANVGDTEQ WFFFCPRAER ELHGGRPART TPSGYWKATG SPSYVYSASA 120
NRVIGEKRTM VFYEGRAPTG SKTRWKMNEY KAVADDDRNA AADAPPPLPG APVRLRNEFS 180
VCRVYISTGT LRSFDRRPLN PPGGVDQAAV HYQQHPALPP PASAMTNPMP AAVDVAARNG 240
HQQAAEDNSH DSSSSGSRGG VAVDGAEDAA AIDWDSYSLI TPADLSFGVD DLSRVVWPPN
|
| 3D Structure ? help Back to Top |
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| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 4e-31 | 17 | 185 | 10 | 163 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 4e-31 | 17 | 185 | 10 | 163 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 4e-31 | 17 | 185 | 10 | 163 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 4e-31 | 17 | 185 | 10 | 163 | NO APICAL MERISTEM PROTEIN |
| 3swm_A | 5e-31 | 17 | 185 | 13 | 166 | NAC domain-containing protein 19 |
| 3swm_B | 5e-31 | 17 | 185 | 13 | 166 | NAC domain-containing protein 19 |
| 3swm_C | 5e-31 | 17 | 185 | 13 | 166 | NAC domain-containing protein 19 |
| 3swm_D | 5e-31 | 17 | 185 | 13 | 166 | NAC domain-containing protein 19 |
| 3swp_A | 5e-31 | 17 | 185 | 13 | 166 | NAC domain-containing protein 19 |
| 3swp_B | 5e-31 | 17 | 185 | 13 | 166 | NAC domain-containing protein 19 |
| 3swp_C | 5e-31 | 17 | 185 | 13 | 166 | NAC domain-containing protein 19 |
| 3swp_D | 5e-31 | 17 | 185 | 13 | 166 | NAC domain-containing protein 19 |
| 4dul_A | 4e-31 | 17 | 185 | 10 | 163 | NAC domain-containing protein 19 |
| 4dul_B | 4e-31 | 17 | 185 | 10 | 163 | NAC domain-containing protein 19 |
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