 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Do006685.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium
|
| Family |
AP2 |
| Protein Properties |
Length: 241aa MW: 26070.9 Da PI: 8.9011 |
| Description |
AP2 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Do006685.1 | genome | Dichan | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | AP2 | 44.1 | 5.1e-14 | 37 | 85 | 1 | 53 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkl 53
+gy+GVr+++ + +W+AeIr p + r r+ lg+f+tae+Aa a+++a+ +
Do006685.1 37 CGYRGVRRRS-SVKWAAEIRQPGD---RNRHCLGSFDTAEQAALAYDQAAYRV 85
79*****888.7*********966...4899*******************986 PP
|
| 2 | AP2 | 49.2 | 1.3e-15 | 146 | 195 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
+y+GVr+++ +g+W+A Ir p + r+r +lg+f+taeeAa a+++a+ l+g
Do006685.1 146 RYRGVRQRR-SGKWAAAIRRPGD---RQRRYLGNFDTAEEAALAYDHAACLLHG 195
8*****999.7*********955...4888********************9998 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 241 aa
Download sequence Send
to blast |
MTLISHESMQ QRQRQGQPGL APRGRTMKPA ALVPAQCGYR GVRRRSSVKW AAEIRQPGDR 60
NRHCLGSFDT AEQAALAYDQ AAYRVYGDAA RLNFPERAAA WEAIAEEKAA EAEDARQAPG 120
RGREFSSGET AAEGQPAPLG PCAPKRYRGV RQRRSGKWAA AIRRPGDRQR RYLGNFDTAE 180
EAALAYDHAA CLLHGAGARL NFPERAASWE GEAAMAATAD EANEADTATA ATADTANTMS 240
L
|
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
