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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Do006064.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium
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| Family |
NAC |
| Protein Properties |
Length: 232aa MW: 25524.8 Da PI: 8.0738 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Do006064.1 | genome | Dichan | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 99.2 | 5.8e-31 | 17 | 93 | 54 | 128 |
NAM 54 eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128
+ +ewyfFs rd+kyatg+r+nratk+gyWkatgkd+ev s ++++vg++ktLvfy grap+g+k+ Wvmhe+rl
Do006064.1 17 TASEWYFFSFRDRKYATGSRTNRATKTGYWKATGKDREVRSPaaSRAVVGMRKTLVFYLGRAPNGVKSCWVMHEFRL 93
567*************************************99878888***************************98 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 232 aa
Download sequence Send
to blast |
MWWSLFWITR ADAAKLTASE WYFFSFRDRK YATGSRTNRA TKTGYWKATG KDREVRSPAA 60
SRAVVGMRKT LVFYLGRAPN GVKSCWVMHE FRLDSPHTPP KEDWVLCRVF QKRKDSEQDT 120
AAGSSSPTFA GSSQAVALPD DQPMMDAYVD QTGSSAVGFP PPQEHVGGFD PLMLHYNSVL 180
SHFPQEVSSS PMMALGLGSG GVGNGCGFFY DTGFEDMAAN IGGMGFPQGW MG
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 5e-29 | 12 | 118 | 64 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 5e-29 | 12 | 118 | 64 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 5e-29 | 12 | 118 | 64 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 5e-29 | 12 | 118 | 64 | 171 | NO APICAL MERISTEM PROTEIN |
| 4dul_A | 5e-29 | 12 | 118 | 64 | 171 | NAC domain-containing protein 19 |
| 4dul_B | 5e-29 | 12 | 118 | 64 | 171 | NAC domain-containing protein 19 |
| Search in ModeBase |
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcriptional activator that mediates auxin signaling to promote lateral root development. Activates the expression of two downstream auxin-responsive genes, DBP and AIR3. {ECO:0000269|PubMed:11114891}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Induced by auxin. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | KM017006 | 1e-157 | KM017006.1 Miscanthus lutarioriparius NAC8 mRNA, complete cds. |
| Publications
? help Back to Top |
- Le Hénanff G, et al.
Grapevine NAC1 transcription factor as a convergent node in developmental processes, abiotic stresses, and necrotrophic/biotrophic pathogen tolerance.
J. Exp. Bot., 2013. 64(16): p. 4877-93
[PMID:24043850] - Ding Y, et al.
Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
BMC Plant Biol., 2013. 13: p. 229
[PMID:24377444] - Xiao D, et al.
SENESCENCE-SUPPRESSED PROTEIN PHOSPHATASE Directly Interacts with the Cytoplasmic Domain of SENESCENCE-ASSOCIATED RECEPTOR-LIKE KINASE and Negatively Regulates Leaf Senescence in Arabidopsis.
Plant Physiol., 2015. 169(2): p. 1275-91
[PMID:26304848] - Huo X,Wang C,Teng Y,Liu X
Identification of miRNAs associated with dark-induced senescence in Arabidopsis.
BMC Plant Biol., 2015. 15: p. 266
[PMID:26530097] - Chen X, et al.
Auxin-Independent NAC Pathway Acts in Response to Explant-Specific Wounding and Promotes Root Tip Emergence during de Novo Root Organogenesis in Arabidopsis.
Plant Physiol., 2016. 170(4): p. 2136-45
[PMID:26850273] - Liu C,Wang B,Li Z,Peng Z,Zhang J
TsNAC1 Is a Key Transcription Factor in Abiotic Stress Resistance and Growth.
Plant Physiol., 2018. 176(1): p. 742-756
[PMID:29122985]
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