PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Cis-element |

Regulation |

Orthologous Group |

Basic Information? help Back to Top

TF ID

Do005899.1

Organism

Dichanthelium oligosanthes

Taxonomic ID

888268

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium

Family

bZIP

Protein Properties

Length: 100aa MW: 11021.7 Da PI: 12.1376

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Do005899.1	genome	Dichan	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	21.6	4.6e-07	5	40	11	46
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 11 qkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLk 46 ++NRe+A+ sR+RK+ ++eL+ +++Le +++L Do005899.1 5 ISNRESAQCSRARKQRCLDELRGSAAVLERRRRELT 40 69****************************999886 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	2.6E-5	5	70	No hit	No description
SuperFamily	SSF57959	5.63E-6	5	43	No hit	No description

Sequence ? help Back to Top
Protein Sequence Length: 100 aa Download sequence Send to blast
LLGEISNRES AQCSRARKQR CLDELRGSAA VLERRRRELT ARQAAHGRLA LVRLANAGLR 60 AEVAALSRRL AAARRALALG RLYHAALMNH RPCSIGDGER

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	32	37	ERRRRE

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Do005899.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_004986317.1	1e-14	ocs element-binding factor 1
TrEMBL	A0A1E5V9L7	3e-59	A0A1E5V9L7_9POAL; Uncharacterized protein (Fragment)
STRING	Si039558m	9e-11	(Setaria italica)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP20974	5	7