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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Do005566.1 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium
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Family |
WRKY |
Protein Properties |
Length: 242aa MW: 26167.3 Da PI: 7.9749 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Do005566.1 | genome | Dichan | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 32.2 | 2.1e-10 | 140 | 162 | 1 | 23 |
---SS-EEEEEEE--TT-SS-EE CS
WRKY 1 ldDgynWrKYGqKevkgsefprs 23
ldDgy+WrKYG+K+vk+s++pr
Do005566.1 140 LDDGYKWRKYGKKSVKNSPNPRY 162
59*******************95 PP
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2 | WRKY | 52.1 | 1.3e-16 | 175 | 215 | 19 | 59 |
SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 19 efprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
++ r+YYrC+++gC+vkk+ver+++dp++v+++Yeg Hnh
Do005566.1 175 DYYRNYYRCSTEGCNVKKRVERDKDDPSYVVTMYEGVHNHV 215
678*************************************5 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 242 aa
Download sequence Send
to blast |
MHMALASWDS LAADAVFPAM AYRHPCSNGG GLASSGFYGA SSPAAALFPQ PAFGGGAAPG 60 LAPPQQPDAF ECLSDEGVSS VVPGTFGTPP PPPPPRQPRM PAEQVVPDAS SGYTTHVRGA 120 AAMATTDRIA FRVRSEEEVL DDGYKWRKYG KKSVKNSPNP RYNFTFGINA FKLIDYYRNY 180 YRCSTEGCNV KKRVERDKDD PSYVVTMYEG VHNHVSPGTI YYATQDAASG RFFVAGMHQL 240 GH
|
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KU058612 | 5e-44 | KU058612.1 UNVERIFIED: Panicum miliaceum WRKY24-like gene, complete sequence. |