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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Do004363.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium
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Family |
Dof |
Protein Properties |
Length: 213aa MW: 22635.2 Da PI: 9.7402 |
Description |
Dof family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Do004363.1 | genome | Dichan | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-Dof | 128.4 | 2.1e-40 | 37 | 96 | 2 | 61 |
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61
+++al+cprCdstntkfCyynnys++qPryfCkaCrryWtkGG+lrnvPvGgg+rknk++
Do004363.1 37 QDQALNCPRCDSTNTKFCYYNNYSMTQPRYFCKACRRYWTKGGTLRNVPVGGGSRKNKQQ 96
7899******************************************************87 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 213 aa
Download sequence Send
to blast |
MVASPPGEEA AAAARNIKAK QAWQQQAAGE RKPRPQQDQA LNCPRCDSTN TKFCYYNNYS 60 MTQPRYFCKA CRRYWTKGGT LRNVPVGGGS RKNKQQRASA ASSAPPASSS SSSGSKKVNN 120 ITQQLMMMPT AVSATTTTAD FSNVLPVLMS TGGGFELPTS DHHQVSLPFV PLSLSSDPDG 180 GSGAAPLFMD MLRGGFLDSN GLAXAANESA IWS
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor that binds specifically to a 5'-AA[AG]G-3' consensus core sequence. May enhance the DNA binding of the bZIP transcription factor Opaque-2 to O2 binding site elements. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK376388 | 9e-55 | AK376388.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv3122H18. |
GenBank | AM084360 | 9e-55 | AM084360.1 Hordeum vulgare subsp. vulgare dof12 gene for dof zinc finger protein 12, exons 1-2. |