 |
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Do003945.1 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium
|
Family |
NAC |
Protein Properties |
Length: 657aa MW: 71422.5 Da PI: 4.3521 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Do003945.1 | genome | Dichan | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 169.9 | 7.9e-53 | 24 | 152 | 1 | 129 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkg 97
l+pGfrFhPtdeelv++yLk+kv g++l++ ++i+evd+yk+ePwdLp+ ++++++++wyfFs+ d+k+a+ r+nrat+ gyWk+tgkd+ev + +
Do003945.1 24 LAPGFRFHPTDEELVSYYLKRKVLGRPLKV-DAIAEVDLYKLEPWDLPArsRLRSRDSQWYFFSRLDRKHANRARTNRATSGGYWKTTGKDREVRH-GP 120
579***************************.99***************4357888999**************************************.99 PP
NAM 98 elvglkktLvfykgrapkgektdWvmheyrle 129
+ vg+kktLvf+ grapkge+t+Wvmheyrle
Do003945.1 121 RIVGMKKTLVFHAGRAPKGERTNWVMHEYRLE 152
9*****************************85 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0009644 | Biological Process | response to high light intensity |
GO:0009962 | Biological Process | regulation of flavonoid biosynthetic process |
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0005737 | Cellular Component | cytoplasm |
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 657 aa
Download sequence Send
to blast |
MTHPSSSSSA PPPPAAAAAE ATSLAPGFRF HPTDEELVSY YLKRKVLGRP LKVDAIAEVD 60 LYKLEPWDLP ARSRLRSRDS QWYFFSRLDR KHANRARTNR ATSGGYWKTT GKDREVRHGP 120 RIVGMKKTLV FHAGRAPKGE RTNWVMHEYR LEGDEAAGIP QDSFVVCRIF QKAGPGPQNG 180 AQYGAPFVEE EWEEDDEDVG LLPVGADTVV DHEVPPGPKE APGALEKGYL QMSDLIQGLG 240 DQNGNGTIGL PVSDTSNNSN HSEEVDGNSG DILSDVNLGS NYLQYVEPGE QNNLMLNENM 300 VSNANAGDFF NNSSPSDGFL ELKDFADAAN LDYPSIWPSD GWAWRTPDNL EAVNGGNNDI 360 PPLPDDQTFQ PDELEQLLQS IQEDSHLGSS IIDPSHSSIT NSVMPEDDSV MFYDAPFDST 420 MCDDGFRQMN GILGSPANLS GIGMVDDGMP YYDAMDDNLF NDILGSIQQP AGSSSHVFNG 480 PVLTQEVNNT MYTCSPTQKV LEPNFVVGAP SSARLPEAGS QFNCVVLPDG QAKSSTLGKR 540 FVKILDSISA PPAFASEFPA NLRKSLAPIS GARPNTFHVS AEVISIGSLA VASGPDKWAL 600 QKDQGMELLF TDFEPDTRMH CGCNTVTTVL RGGFCLVFFS AIMLLVSYEV GMCIYGK
|
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | BT063917 | 0.0 | BT063917.1 Zea mays full-length cDNA clone ZM_BFc0120A04 mRNA, complete cds. |
GenBank | KJ728019 | 0.0 | KJ728019.1 Zea mays clone pUT6155 NAC transcription factor (NAC12) mRNA, partial cds. |