PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium

Family

G2-like

Protein Properties

Length: 519aa MW: 57379.4 Da PI: 5.8178

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Do003251.1	genome	Dichan	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	100.2	1.3e-31	125	178	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtp+LH +Fv+ave+LGG+e+AtPk +l++m+v gL+++hvkSHLQ+YR+ Do003251.1 125 PRLRWTPDLHMAFVHAVERLGGQERATPKLVLQMMNVRGLSIAHVKSHLQMYRS 178 8****************************************************7 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51294	11.627	121	181	IPR017930	Myb domain
Gene3D	G3DSA:1.10.10.60	1.3E-29	121	179	IPR009057	Homeodomain-like
SuperFamily	SSF46689	4.3E-14	123	179	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	3.2E-22	125	180	IPR006447	Myb domain, plants
Pfam	PF00249	9.0E-9	126	177	IPR001005	SANT/Myb domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 519 aa Download sequence Send to blast
MVEQYKMVAR EEQVMRELKD KGVLVEILED DEERLINNKL LDLNEDFDEE TEEGEVGGDE 60 EDEGEEGDDG GSTTDVGGSG SSSNNSSTNN NSESKKGDTK GGDKSEGSGE QRVPSVRQYN 120 RSKMPRLRWT PDLHMAFVHA VERLGGQERA TPKLVLQMMN VRGLSIAHVK SHLQMYRSKK 180 LDQDGRPKGA ISSAYSPMDF HFMRGDGRFH EMSFFQRAAA LSSKPEHGSF FASRNCSAPE 240 LSRIYGLLQH RQAPQTFDFR NSRNHEWASS QREAIISRKD VTVTEPSTAP HQIQTHPLAA 300 SVALRSERRW WPFTDAAAAA TIGERRVETG TDASFANSIG SSSRPHLWAM STVVSGDRRL 360 PFRWRPGGSG RDVVAGYTSN SAKITTRSSD PVVIDDEALD AQQLEKHVEA RDSVMPAYKA 420 CRKRSSPVEA QDGTADLQLS LSPTTVMEAK KRKTTALSDQ EVMDNSELSI SLSLSPPAAA 480 SIQKQQQERT RRSNDSGSSD EAILGQSTLD LTMSIRALE

Sequence ? help Back to Top

Protein Sequence Length: 519 aa Download sequence Send to blast

MVEQYKMVAR EEQVMRELKD KGVLVEILED DEERLINNKL LDLNEDFDEE TEEGEVGGDE  60
EDEGEEGDDG GSTTDVGGSG SSSNNSSTNN NSESKKGDTK GGDKSEGSGE QRVPSVRQYN  120
RSKMPRLRWT PDLHMAFVHA VERLGGQERA TPKLVLQMMN VRGLSIAHVK SHLQMYRSKK  180
LDQDGRPKGA ISSAYSPMDF HFMRGDGRFH EMSFFQRAAA LSSKPEHGSF FASRNCSAPE  240
LSRIYGLLQH RQAPQTFDFR NSRNHEWASS QREAIISRKD VTVTEPSTAP HQIQTHPLAA  300
SVALRSERRW WPFTDAAAAA TIGERRVETG TDASFANSIG SSSRPHLWAM STVVSGDRRL  360
PFRWRPGGSG RDVVAGYTSN SAKITTRSSD PVVIDDEALD AQQLEKHVEA RDSVMPAYKA  420
CRKRSSPVEA QDGTADLQLS LSPTTVMEAK KRKTTALSDQ EVMDNSELSI SLSLSPPAAA  480
SIQKQQQERT RRSNDSGSSD EAILGQSTLD LTMSIRALE

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
6j4r_A	1e-17	126	180	3	57	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B	1e-17	126	180	3	57	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C	1e-17	126	180	3	57	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D	1e-17	126	180	3	57	Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Do003251.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_025824416.1	0.0	uncharacterized protein LOC112899951 isoform X2
TrEMBL	A0A1E5V647	0.0	A0A1E5V647_9POAL; Uncharacterized protein
STRING	Si016955m	0.0	(Setaria italica)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP2754	36	86

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G42660.1	2e-34	G2-like family protein