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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Do002880.1 |
| Organism |
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| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium
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| Family |
MYB |
| Protein Properties |
Length: 266aa MW: 28177.2 Da PI: 6.8761 |
| Description |
MYB family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Do002880.1 | genome | Dichan | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Myb_DNA-binding | 53.7 | 4.7e-17 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
rg+WT Ed+ l+ +vk +G g W+ ++++ g++R++k+c++rw++yl
Do002880.1 14 RGAWTSKEDDTLAAYVKAHGEGKWREVPQKAGLRRCGKSCRLRWLNYL 61
89********************************************97 PP
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| 2 | Myb_DNA-binding | 51.1 | 3.2e-16 | 67 | 111 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
rg+ + +E++l+++++k+lG++ W++Ia++++ gRt++++k++w++
Do002880.1 67 RGNISDDEEDLIIRLHKLLGNR-WSLIAARLP-GRTDNEIKNYWNST 111
78999*****************.*********.***********986 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 266 aa
Download sequence Send
to blast |
MGRRACCAKE GVKRGAWTSK EDDTLAAYVK AHGEGKWREV PQKAGLRRCG KSCRLRWLNY 60
LRPNIKRGNI SDDEEDLIIR LHKLLGNRWS LIAARLPGRT DNEIKNYWNS TLGRRAGAGG 120
SSSRVVVGTP DTGASHATAA ASGSCETGQK GDAPRADPDS VGSAAWAASA AVWAPKAVRC 180
TGGLFFHRDL DTPPPGGETP TAGGAGGSGE GSSDDCSSSA ASTFAGIDDE PCFSGSGDWM 240
DDVRALASFL ESDEEWVRCQ MAEQLT
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| Functional Description ? help
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| Source |
Description |
| UniProt | Controls the expression of genes involved in anthocyanin biosynthesis. Regulates the expression of at least 3 structural genes: chalcone synthase, dihydroflavonol reductase and flavonol O(3) glucosyltransferase. C1 acts as a trans-acting factor. |
| Publications
? help Back to Top |
- Chen B,Wang X,Hu Y,Wang Y,Lin Z
Ectopic expression of a c1-I allele from maize inhibits pigment formation in the flower of transgenic tobacco.
Mol. Biotechnol., 2004. 26(3): p. 187-92
[PMID:15004287] - Paz-Ares J,Ghosal D,Saedler H
Molecular analysis of the C1-I allele from Zea mays: a dominant mutant of the regulatory C1 locus.
EMBO J., 1990. 9(2): p. 315-21
[PMID:2303027] - Cone KC,Burr FA,Burr B
Molecular analysis of the maize anthocyanin regulatory locus C1.
Proc. Natl. Acad. Sci. U.S.A., 1986. 83(24): p. 9631-5
[PMID:3025847] - Paz-Ares J,Ghosal D,Wienand U,Peterson PA,Saedler H
The regulatory c1 locus of Zea mays encodes a protein with homology to myb proto-oncogene products and with structural similarities to transcriptional activators.
EMBO J., 1987. 6(12): p. 3553-8
[PMID:3428265] - Scheffler B, et al.
Molecular analysis of C1 alleles in Zea mays defines regions involved in the expression of this regulatory gene.
Mol. Gen. Genet., 1994. 242(1): p. 40-8
[PMID:7904044] - Franken P,Schrell S,Peterson PA,Saedler H,Wienand U
Molecular analysis of protein domain function encoded by the myb-homologous maize genes C1, Zm 1 and Zm 38.
Plant J., 1994. 6(1): p. 21-30
[PMID:7920701] - Singer T,Gierl A,Peterson PA
Three new dominant C1 suppressor alleles in Zea mays.
Genet. Res., 1998. 71(2): p. 127-32
[PMID:9717435]
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