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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Do002532.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium
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Family |
NF-YA |
Protein Properties |
Length: 193aa MW: 21304.3 Da PI: 7.4189 |
Description |
NF-YA family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Do002532.1 | genome | Dichan | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | CBFB_NFYA | 104.4 | 9.9e-33 | 87 | 143 | 1 | 58 |
CBFB_NFYA 1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58
+ep+YVNaKQy++Il+RRq+Rak+e+e+kl k+rkpylheSRh+hAl+R+Rg gGrF
Do002532.1 87 EEPVYVNAKQYNAILRRRQSRAKAESERKL-VKGRKPYLHESRHQHALKRARGAGGRF 143
69****************************.**************************9 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0045892 | Biological Process | negative regulation of transcription, DNA-templated |
GO:0016602 | Cellular Component | CCAAT-binding factor complex |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 193 aa
Download sequence Send
to blast |
EGIMTSVVHS VSDHRAEDQQ QKQPEPEDQQ EAPVTSSDSQ PTAQYAYPNI DPYYGSLYAA 60 YGGQPMMHPP LVGMHPTGLL LPTDAIEEPV YVNAKQYNAI LRRRQSRAKA ESERKLVKGR 120 KPYLHESRHQ HALKRARGAG GRFLNSKSDE KEENSDSSHK EKQNGVAPHE SSQPSTPPSP 180 NGASSANQAD SHK
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Functional Description ? help
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Source |
Description |
UniProt | Stimulates the transcription of various genes by recognizing and binding to a CCAAT motif in promoters. {ECO:0000250}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | EU969919 | 1e-176 | EU969919.1 Zea mays clone 337251 nuclear transcription factor Y subunit A-7 mRNA, complete cds. |