 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Do002250.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium
|
| Family |
LBD |
| Protein Properties |
Length: 288aa MW: 31423.3 Da PI: 6.0302 |
| Description |
LBD family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Do002250.1 | genome | Dichan | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF260 | 113.6 | 1.3e-35 | 12 | 111 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99
aCaaCk++rr+C+++C+la+yfp+++p+ f+n+h+lFG+sn+lk+l+++ +e+r++am++++ye++a+ P +G+v +i+ lqq+++q++ +l ++++
Do002250.1 12 ACAACKYQRRRCTPECPLAEYFPHDRPRVFRNAHRLFGVSNILKTLARAGPEKRREAMHCIIYESQAWDIYPASGCVPIIHGLQQRIRQAELDLRSVHA 110
7******************************************************************************************99999887 PP
DUF260 100 e 100
+
Do002250.1 111 N 111
5 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 288 aa
Download sequence Send
to blast |
MAAPGGGGAG AACAACKYQR RRCTPECPLA EYFPHDRPRV FRNAHRLFGV SNILKTLARA 60
GPEKRREAMH CIIYESQAWD IYPASGCVPI IHGLQQRIRQ AELDLRSVHA NIQAYRAAQG 120
RDVPELDGDS FGAASPPAPP TSFQFQPAAG NNDNAGGGGL SFFYGGDLMN AATSNDDNIA 180
TETSIAPLQM PSWIMQTPHY NMKNTAAAAN VVGKLVPQPS HDYRFLVDAT MVQHQPQQPI 240
PMQPAELDDE MSYFVEDGDN EMLHESSMNT SENKAMKAPK MEDANGFK
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | HG670306 | 1e-45 | HG670306.1 Triticum aestivum chromosome 3B, genomic scaffold, cultivar Chinese Spring. |
