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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Do001819.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium
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Family |
WOX |
Protein Properties |
Length: 168aa MW: 19125.7 Da PI: 9.746 |
Description |
WOX family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Do001819.1 | genome | Dichan | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Homeobox | 63.7 | 2.7e-20 | 29 | 88 | 3 | 57 |
--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
Homeobox 3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
+R++++++q+++Le l++ r+p+ ++e+++++l +++ ++V++WFqN++a+e++
Do001819.1 29 TRWNPSPDQIKVLEMLYRGgMRTPNSFQIEQITEELgkygRIEGKNVFYWFQNHKARERQ 88
8*****************99**************************************97 PP
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2 | Wus_type_Homeobox | 115.8 | 2.1e-37 | 28 | 90 | 3 | 65 |
Wus_type_Homeobox 3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65
+tRW+P+p+Qik+Le+ly+ G+rtPn+ +i++it+eL +yG+ie+kNVfyWFQN+kaRerqkq
Do001819.1 28 TTRWNPSPDQIKVLEMLYRGGMRTPNSFQIEQITEELGKYGRIEGKNVFYWFQNHKARERQKQ 90
79***********************************************************97 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 168 aa
Download sequence Send
to blast |
MVVLPEFARV RNASRLLNCT VQVPTAGTTR WNPSPDQIKV LEMLYRGGMR TPNSFQIEQI 60 TEELGKYGRI EGKNVFYWFQ NHKARERQKQ KRAALLTLST TSSLPPAETK DGVEKKKEAY 120 EDASRRKRRC RTWGDVHGDG ATTEVVAECT DDVTLELFPL RPDQGKAN
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Nucleic Localization
Signal ? help
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 |
No. |
Start |
End |
Sequence |
1 | 114 | 128 | KKKEAYEDASRRKRR |
Functional Description ? help
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Source |
Description |
UniProt | Transcription factor which may be involved in developmental processes. {ECO:0000250}. |
UniProt | Transcription factor which may be involved in developmental processes. {ECO:0000250}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | BT035518 | 1e-93 | BT035518.1 Zea mays full-length cDNA clone ZM_BFb0067L08 mRNA, complete cds. |
GenBank | BT085195 | 1e-93 | BT085195.1 Zea mays full-length cDNA clone ZM_BFb0326G17 mRNA, complete cds. |
GenBank | EU964275 | 1e-93 | EU964275.1 Zea mays clone 277479 WUSCHEL-related homeobox 4 mRNA, complete cds. |