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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Do001452.1 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium
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| Family |
Trihelix |
| Protein Properties |
Length: 395aa MW: 42124.1 Da PI: 8.6469 |
| Description |
Trihelix family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Do001452.1 | genome | Dichan | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | trihelix | 53.6 | 6e-17 | 76 | 164 | 2 | 71 |
trihelix 2 WtkqevlaLiearremeerlrrgk...................lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr 71
Wt +e+l Li+a+ +++r g +++++W++v ++++ +g+ rs++qC++kw+nl ++ykk+++ e +
Do001452.1 76 WTLHETLILITAKHLDDDRRAGGLhghghghgvpaagspttprSAEQRWKWVENYCWNHGCLRSQNQCNDKWDNLLRDYKKVRDYETRT 164
*************977766665434445666777777777777*****************************************99875 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 395 aa
Download sequence Send
to blast |
MSANTVAKAA PQAPMSGSSD PSPSSSAAVS PLALLRPHPH AHAHGHMAPP SPASAGPAPP 60
PPSPASAPRD YRKGNWTLHE TLILITAKHL DDDRRAGGLH GHGHGHGVPA AGSPTTPRSA 120
EQRWKWVENY CWNHGCLRSQ NQCNDKWDNL LRDYKKVRDY ETRTAAAAAA APGSGGGAGA 180
LPSYWTMERH ERKDRNLPTN LAPEVFDALT DVLSRRAARR GGAAIAAAPP SPLALPPPPP 240
PPPPPAPPSP PKPLIAQPRP PPPPPLALPT AVAPPATSVS AEELTGSSES GEEEEGSEED 300
GEEEPEPKRR RLNRLGSSVV RSATVLARTL VACEEKRERR HREVLELEER RLRLEEQRTE 360
VRRQGFAGLV SAVNSLSSAI HALVSDHRSG DSASR
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