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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Do000756.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium
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Family |
Trihelix |
Protein Properties |
Length: 396aa MW: 42288.7 Da PI: 7.1715 |
Description |
Trihelix family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Do000756.1 | genome | Dichan | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | trihelix | 47.9 | 3.6e-15 | 63 | 144 | 2 | 86 |
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkm.rergfer...spkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86
W++ + +Li+a e+ +l+rg+l+ p+W+ev++++ ++ g+++ s +qCk++++ l+k+yk +k+ +++ ++pyfd+l+
Do000756.1 63 WSDGATSTLIDAWGERFVALGRGSLRHPQWQEVAEVVsSRDGYSKppkSDVQCKNRIDTLKKKYKIEKAKRGS-------SWPYFDRLD 144
*************************************87889976333778*****************99996.......5******98 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 396 aa
Download sequence Send
to blast |
MDDDGAASLS PSPSPSRSPS PLPVADPVTV AAAPPGHVAV AIPLRKPSPS SGGGGGGGRE 60 DAWSDGATST LIDAWGERFV ALGRGSLRHP QWQEVAEVVS SRDGYSKPPK SDVQCKNRID 120 TLKKKYKIEK AKRGSSWPYF DRLDDLLAPV LKPNSSSSSA AAAAARNAVP IVPPRINFPQ 180 RTRTPLQPSA GNKRRMPSPP PQASASSDSS DGFPPEAPSA LPNGKRQRLE EPAPAAAANG 240 AESSDSRVQG LRDLALAIRR LGEVYERVES VKREQELRME RERLDAAREL EDQRVQFFLK 300 MQAELSKATG AATAAAPMAV PIPADGNGTR RSGMAAEVAT SSNHRVRYRF KGSSHRHAEQ 360 QPHYQNNAAS GGNGSDSDNK EAEAEEDAED EEEESQ
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Best hit in Arabidopsis thaliana ? help
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Hit ID |
E-value |
Description |
AT3G58630.1 | 1e-34 | sequence-specific DNA binding transcription factors |