PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dca8764.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Caryophyllaceae; Caryophylleae; Dianthus
Family FAR1
Protein Properties Length: 243aa    MW: 27285.6 Da    PI: 5.5856
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dca8764.1genomeDCAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR148.52.9e-1588183191
       FAR1   1 kfYneYAkevGFsvrkskskks.krngeitkrtfvCskegkreeekkk....tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 
                ++Y+++++ +GFs+rk +  +     + +t+r f Cs++g++ + +++     + ++++   tr +Cka ++  +++ g wev +   eHnH+l+p
  Dca8764.1  88 EMYKKHSQVMGFSTRKGTILRVsGVGTPVTQRYFLCSCQGEHGNGSRRglkgVSVQQKNALITRSECKAWIRTLLNEAGLWEVVDHIIEHNHPLTP 183
                58**************9987763677889*************9999999998788889999********************************986 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031011.1E-1288183IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 243 aa     Download sequence    Send to blast
MSNNKTKTID LFEIENVIDL EKDASENVID LEKDAPEEDV FEGGSDDNPV DKERDEVGVD  60
DNLGDMKDFD FSRSLVGVKA KSSEDLYEMY KKHSQVMGFS TRKGTILRVS GVGTPVTQRY  120
FLCSCQGEHG NGSRRGLKGV SVQQKNALIT RSECKAWIRT LLNEAGLWEV VDHIIEHNHP  180
LTPPQWQHHH RLERRISEAE GEVIKAMTET LVAPSVQFRV ASAVASGDTL VGHTKRDHIK  240
LIY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.15e-10FAR1-related sequence 5