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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Dca7449.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Caryophyllaceae; Caryophylleae; Dianthus
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Family |
HD-ZIP |
Protein Properties |
Length: 334aa MW: 37949.7 Da PI: 4.382 |
Description |
HD-ZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Dca7449.1 | genome | DCA | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Homeobox | 62.4 | 7e-20 | 96 | 149 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
k++++++eq++ Le+ Fe ++++ e++ +LAk+lgL+ rqV +WFqNrRa++k
Dca7449.1 96 KKRRLSNEQVQFLEKSFETDNKLEPERKIQLAKELGLQPRQVAIWFQNRRARWK 149
56689************************************************9 PP
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2 | HD-ZIP_I/II | 125.5 | 2.4e-40 | 95 | 185 | 1 | 91 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91
ekkrrls+eqv++LE+sFe+++kLeperK +la+eLglqprqva+WFqnrRAR+ktkq+Ekd+++L+++++ lk++ e L ke+e+L++e+
Dca7449.1 95 EKKRRLSNEQVQFLEKSFETDNKLEPERKIQLAKELGLQPRQVAIWFQNRRARWKTKQMEKDFDKLQANFNCLKSDYECLLKEKEKLQAEV 185
69**************************************************************************************987 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 334 aa
Download sequence Send
to blast |
MAKRVFGDGI GGGGGGSTTT TTVLLQNQRL FSAPHSLEPF SLSGSSSSFL GSSSMVSFED 60 VCGGGLKRSE RPFFCIYDQE EVGDDDYDEY LHQPEKKRRL SNEQVQFLEK SFETDNKLEP 120 ERKIQLAKEL GLQPRQVAIW FQNRRARWKT KQMEKDFDKL QANFNCLKSD YECLLKEKEK 180 LQAEVLHLTD KLQVKEQGNS DSNTMSEQLQ TIQQGANVES ASESDEQHAS LFEYNKQEDL 240 SSAKSDVIDS DSSYYVEPGE SSYAFEPDQS DISQDDEDYL NKTLLHSTHV FPKIEDDVDT 300 PANPGHFGLT EEDHAPLFWP YWDINLKIPS SLYM
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Nucleic Localization
Signal ? help
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 |
No. |
Start |
End |
Sequence |
1 | 143 | 151 | RRARWKTKQ |