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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Dca53982.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Caryophyllaceae; Caryophylleae; Dianthus
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Family |
HD-ZIP |
Protein Properties |
Length: 287aa MW: 32948.4 Da PI: 4.9441 |
Description |
HD-ZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Dca53982.1 | genome | DCA | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Homeobox | 60.3 | 3.1e-19 | 76 | 129 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
k++++t eq++ Le+ Fe++ ++ e++++LAk+lgL+ rq+ +WFqNrRa++k
Dca53982.1 76 KKRRMTIEQVQFLEKSFEMDIKLEPERKAQLAKELGLQPRQIAIWFQNRRARWK 129
56689************************************************9 PP
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2 | HD-ZIP_I/II | 126.3 | 1.3e-40 | 75 | 167 | 1 | 93 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93
ekkrr++ eqv++LE+sFe++ kLeperK++la+eLglqprq+a+WFqnrRAR+ktkq+Ekd++aL+++y+ lk++ ++L ke+e+L++e+++
Dca53982.1 75 EKKRRMTIEQVQFLEKSFEMDIKLEPERKAQLAKELGLQPRQIAIWFQNRRARWKTKQMEKDFDALQASYNGLKSDYDSLVKEKEKLKDEVDN 167
69**************************************************************************************99875 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0001558 | Biological Process | regulation of cell growth |
GO:0009637 | Biological Process | response to blue light |
GO:0009651 | Biological Process | response to salt stress |
GO:0009965 | Biological Process | leaf morphogenesis |
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0042803 | Molecular Function | protein homodimerization activity |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 287 aa
Download sequence Send
to blast |
MANSGVRRVF GSQPFFISGS SSSSSSSSFL GSSSMVSFED VCWGGKRSSG RPFFCTYDQE 60 DNGDDDYDEF LHQPEKKRRM TIEQVQFLEK SFEMDIKLEP ERKAQLAKEL GLQPRQIAIW 120 FQNRRARWKT KQMEKDFDAL QASYNGLKSD YDSLVKEKEK LKDEVDNLTS KLQLKEQKPF 180 NQSKTVHRET VVESNSESEE RRHLSVFGYN KQEDLSSAKS DVVDSDSPHY VDRGAPCAFE 240 ADQSSHAFTE VKDVDQSANF ELSGDEHAQL LWPYWDINLK IPNSLNM
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Nucleic Localization
Signal ? help
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 |
No. |
Start |
End |
Sequence |
1 | 123 | 131 | RRARWKTKQ |