PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dca43730.1
Organism
Dianthus caryophyllus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Caryophyllaceae; Caryophylleae; Dianthus
Family bZIP
Protein Properties Length: 476aa    MW: 52034.1 Da    PI: 6.9148
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dca43730.1genomeDCAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_134.25.5e-11326384563
                 CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                 kr++r   NR +A rs +RK  +i eLe kv++L++e ++L  +l  l+     l+s++
  Dca43730.1 326 KRAKRILANRQSAARSKERKMRYISELEHKVQTLQNEATTLSAQLTLLQRDFTGLTSQN 384
                 9***********************************************99988888877 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.2E-19322386IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.082324387IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.6E-11326383No hitNo description
SuperFamilySSF579591.61E-11326382No hitNo description
PfamPF001701.0E-9326384IPR004827Basic-leucine zipper domain
CDDcd147032.76E-24327378No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0005829Cellular Componentcytosol
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 476 aa     Download sequence    Send to blast
MSQIRPPLPQ NSHNFQSFGC ENNGSRRSGI PPSHPPISPY SQNPKGGQNS GRGPSHSRSL  60
SQPSFFMNDA LPPLSPSPYQ NSNSPPNGRE NGNLSNDGSL ESCRGNSLHI TEGLPPRKLH  120
RRSVSDIPFG FDSITQLSPP PVPQLVKKEL SWERNCEGNV DGEVVDDLLS AYMNLDSIDA  180
LNSSGTDEKT GNENRDDMDS HASGSKTNGF DSSDNEAESS MNESRSGGPR QGERKRSATS  240
EAVSNTRHYR SVSMDSFMGS MSFGDESPKL PPSPSTGVAQ LSLKDPRSGN SNGFSLEFGN  300
GEFTAAELKK IMANDKLAEV ALTDPKRAKR ILANRQSAAR SKERKMRYIS ELEHKVQTLQ  360
NEATTLSAQL TLLQRDFTGL TSQNNELKFR LQAMEQQAQL RDALNETLTT EIQRLKIAAG  420
ELNSESMSKC FGQQLNINSQ IFQQKQHLPT ENNAAHEHAK VQDSSNGSRT NSGSSN
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010665860.10.0PREDICTED: uncharacterized protein LOC104883107
TrEMBLA0A0J8B6710.0A0A0J8B671_BETVU; Uncharacterized protein
STRINGXP_010665860.10.0(Beta vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38900.31e-111bZIP family protein