 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Dca43711.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Caryophyllaceae; Caryophylleae; Dianthus
|
| Family |
DBB |
| Protein Properties |
Length: 209aa MW: 22874.7 Da PI: 6.1435 |
| Description |
DBB family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Dca43711.1 | genome | DCA | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-B_box | 24.2 | 7e-08 | 4 | 33 | 5 | 34 |
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeH 34
C+ +e+ +++fC ++ lC+ C ++ H
Dca43711.1 4 LCDVCESAAAIFFCAADEAALCRACDEKVH 33
7**************************998 PP
|
| 2 | zf-B_box | 30.5 | 7.7e-10 | 53 | 92 | 3 | 38 |
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg....Ht 38
+kC+ +e+ ++ ++Ce +++ lC +C ++ H g H+
Dca43711.1 53 VPKCDICENAPAYFYCEIDGSSLCLQCDMAVHVGgkrtHR 92
689*****************************66666776 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0007623 | Biological Process | circadian rhythm |
| GO:0010100 | Biological Process | negative regulation of photomorphogenesis |
| GO:0010228 | Biological Process | vegetative to reproductive phase transition of meristem |
| GO:0005622 | Cellular Component | intracellular |
| GO:0008270 | Molecular Function | zinc ion binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 209 aa
Download sequence Send
to blast |
MRTLCDVCES AAAIFFCAAD EAALCRACDE KVHLCNKLAS RHVRVGLDAP NAVPKCDICE 60
NAPAYFYCEI DGSSLCLQCD MAVHVGGKRT HRRYLLLRQR AEFPGDSSVQ NGDLNAQHAD 120
RTEVMREPNH TSSPSMREGE QNHLVSVVPT FNGNNGTDAQ MDATMIDLNA RPQRTAGQSR 180
NNQGMNAVAG TNDDSTCMVP LGFKREPEK
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Acts as negative regulator of seedling photomorphogenesis. {ECO:0000269|PubMed:18540109}. |
