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Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Dca37308.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Caryophyllaceae; Caryophylleae; Dianthus
|
| Family |
bZIP |
| Protein Properties |
Length: 401aa MW: 42772.1 Da PI: 6.3571 |
| Description |
bZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Dca37308.1 | genome | DCA | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | bZIP_1 | 65.8 | 7.8e-21 | 299 | 358 | 1 | 60 |
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklk 60
e+elkr+rrkq+NRe+ArrsR+RK+ae++eL++++++L++eN L++el++++ ++
Dca37308.1 299 ERELKRQRRKQSNRESARRSRLRKQAECDELAQRAEVLKEENANLRSELDRIRSDYDHIM 358
89**************************************************99987655 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 401 aa
Download sequence Send
to blast |
MGSSETDKPA KEPKTPPLSS APEQSSAAST PTVNAEWPGY QAYSHIPPPG FMASNPQAHP 60
YMWGVQHMMP PYGTPPHPYV AMYPHGGLYA HPSMPPGSYP YGPFAMPSPN GMAEVSGNTN 120
GNTDAESKQV EGKEKLPVKR MRGSLGSLNM LTGKNKEGKT TGTAANGDCS KSAESGSDSS 180
SEGSDANSQN DSPMKSQGRQ EAGEAEVSQN GNFTHATQNG GVTAPHTMVN QAMAGAQMAG 240
PGAVTGPATN LNIGMDYWGT PASSPIPPMR GQVSASVAAG LVSAGSRDNL QSQLWLQDER 300
ELKRQRRKQS NRESARRSRL RKQAECDELA QRAEVLKEEN ANLRSELDRI RSDYDHIMAE 360
NALLKERLGI TSEDLGSNQP VLSLANETQE SVKTDQGQNG H
|
| Nucleic Localization
Signal ? help
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 |
| No. |
Start |
End |
Sequence |
| 1 | 315 | 321 | RRSRLRK |
| 2 | 315 | 322 | RRSRLRKQ |
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcriptional activator that binds to the G-box motif (5'-CACGTG-3') and other cis-acting elements with 5'-ACGT-3' core, such as Hex, C-box and as-1 motifs. Possesses high binding affinity to G-box, much lower affinity to Hex and C-box, and little affinity to as-1 element (PubMed:18315949). G-box and G-box-like motifs are cis-acting elements defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control (Probable). Binds to the G-box motif 5'-CACGTG-3' of LHCB2.4 (At3g27690) promoter. May act as transcriptional repressor in light-regulated expression of LHCB2.4. Binds DNA as monomer. DNA-binding activity is redox-dependent (PubMed:22718771). {ECO:0000269|PubMed:18315949, ECO:0000269|PubMed:22718771, ECO:0000305|PubMed:18315949}. |
| Best hit in Arabidopsis thaliana ? help
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| Hit ID |
E-value |
Description |
| AT2G35530.1 | 1e-110 | basic region/leucine zipper transcription factor 16 |
