 |
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Dca28785.1 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Caryophyllaceae; Caryophylleae; Dianthus
|
Family |
Trihelix |
Protein Properties |
Length: 293aa MW: 32956.1 Da PI: 9.8021 |
Description |
Trihelix family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Dca28785.1 | genome | DCA | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | trihelix | 47.1 | 6.3e-15 | 30 | 112 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86
+W++ v +L+ea+++++ +r+klk+++We+v++ + + + ++++qCk+k+e+++kry+ + + + + ++p+f++l+
Dca28785.1 30 EWSEGAVTVLLEAYESKWVLRNRAKLKGQDWEDVARCVssrgNKSKSPKTQTQCKNKIESMKKRYRSESAAQLS-------SWPLFSRLD 112
5*************************************55444445567889**************99887765.......599999997 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 293 aa
Download sequence Send
to blast |
MGEENTTQND QSPRKQPASA GGGDRLKRDE WSEGAVTVLL EAYESKWVLR NRAKLKGQDW 60 EDVARCVSSR GNKSKSPKTQ TQCKNKIESM KKRYRSESAA QLSSWPLFSR LDHLLRGTNP 120 PPPSQPLQLA AVVESSSMAV PTLEAPVVLL AQNQSQESTD VDAMVKENEG MRAKPCDQVT 180 DKNNKNDHDN HQETDSSTPA VYSSDRVKTT MKRKRQRRGK SRGLEEVSES MRWLVDAVVR 240 SEQARMDTLR DVERMRVEAE AKRGEMDVKR TEIIANTQLE IARLFAAVAG KKC
|
Best hit in Arabidopsis thaliana ? help
Back to Top |
Hit ID |
E-value |
Description |
AT3G54390.1 | 6e-87 | sequence-specific DNA binding transcription factors |