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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Dca18912.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Caryophyllaceae; Caryophylleae; Dianthus
|
| Family |
G2-like |
| Protein Properties |
Length: 292aa MW: 32059.3 Da PI: 6.9535 |
| Description |
G2-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Dca18912.1 | genome | DCA | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | G2-like | 106.5 | 1.5e-33 | 26 | 80 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
kprlrWt+eLHerF++av+qLGG++kAtPktil++m+vkgLtl+h+kSHLQkYR+
Dca18912.1 26 KPRLRWTSELHERFIDAVSQLGGPKKATPKTILRTMGVKGLTLYHLKSHLQKYRM 80
79****************************************************7 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0009567 | Biological Process | double fertilization forming a zygote and endosperm |
| GO:0010628 | Biological Process | positive regulation of gene expression |
| GO:0005634 | Cellular Component | nucleus |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 292 aa
Download sequence Send
to blast |
MYTTSHGTWE SVGGEEACVV LTTDPKPRLR WTSELHERFI DAVSQLGGPK KATPKTILRT 60
MGVKGLTLYH LKSHLQKYRM GKQPSKEATE NSKDASFKGD IHDTDSSTSS AKIKDQELND 120
GNQVTEALRV QMEVQRRLHE QLEVPRHLQL RIEAQGKYLH SLVEKACKAL SDQAAVSSYG 180
FEAAHEELSE LAIRISASES SGLVLPDTVK MPSSLAPVTP LHDVRNAPMV SAWISDCSVD 240
SCLTSMESPV SPLGAPSHPF AAKKRTRHVF GNGDMIPIDC SSDQVGWIMA NI
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 6j4r_A | 1e-19 | 26 | 82 | 1 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_B | 1e-19 | 26 | 82 | 1 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_C | 1e-19 | 26 | 82 | 1 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_D | 1e-19 | 26 | 82 | 1 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| Search in ModeBase |
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcriptional activator (PubMed:26586833). Probable component of the central regulatory system controlling transcriptional responses to Pi starvation (PubMed:26586833). Binds in a sequence-specific manner to phosphate starvation-regulated promoters (PubMed:26586833). Required for female gametophyte development and function (PubMed:15634699). {ECO:0000269|PubMed:15634699, ECO:0000269|PubMed:26586833}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Up-regulated in roots by low Pi. {ECO:0000269|PubMed:26586833}. |
