PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Gene Ontology |

Function |

Regulation |

Publication

Basic Information? help Back to Top

TF ID

Dca1520.1

Organism

Dianthus caryophyllus

Taxonomic ID

3570

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Caryophyllaceae; Caryophylleae; Dianthus

Family

bZIP

Protein Properties

Length: 841aa MW: 92250.8 Da PI: 5.632

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dca1520.1	genome	DCA	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	47.6	3.6e-15	266	326	3	63
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 ++kr r+++NRe+A+ sRqRKk+++eeLe+kv ++ + ++L +++ e a+l++++ Dca1520.1 266 DDKRKARLIRNRESAQLSRQRKKQYVEELEDKVRAMHSTITDLNTKISYFMTENASLRQQL 326 79*******************************************************9986 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	4.2E-19	264	328	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	10.553	266	326	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	5.4E-13	267	326	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	8.75E-13	268	326	No hit	No description
Gene3D	G3DSA:1.20.5.170	2.0E-17	268	328	No hit	No description
CDD	cd14704	1.04E-21	269	320	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 841 aa Download sequence Send to blast
MEEPPPYYHR ENHLQDGDVG LSMPSLDPHF PLFPENGDDN DVFTTAAAAV DGDFLMNVDF 60 DFTFDDLSFA DNLLLEQPEP NSDSDLVVLS SDISQEWANP NSDESGCDPT RDGDVRVYEC 120 LPVSSEESNF RGKCDSPEIG SSKSNSGVYS GKSCDDNSVD HNNNNNNNSN NINGNDNENH 180 SVDHLKLGQK MIKVEHAKPS DQTTKDSCSS GSTVKCASKS KSKRKIEAEQ DHGSSETRVR 240 KFRRGNVSVI KKNDDENVDD DGDDDDDKRK ARLIRNRESA QLSRQRKKQY VEELEDKVRA 300 MHSTITDLNT KISYFMTENA SLRQQLSCAG SNGGGGVAGH GMPVHGVYPV QPMAPMAYPW 360 MVYPPAYMVK HQGSNVPLVP IPRLKPQQGV PSTKVKKSCE TRKEKEKKEK RKGDGKTKKV 420 ASVSLLGLLF FMLLCGGILP MVSVRYGSFG GRVDGVQKGA VFVVDKHAET EGYKQSNNSN 480 SGNGSEPLVA SLFVPRNDKL VKIDGNLIIH SVLASEKAMT SQSAKGPKTP EETGLAIHGS 540 YPPYPTPGPG SNNWRRPHLD RNQSGRQRAL GSGSADFTPI GSDGKLQQWF REGLAGPMLS 600 SGMCTEVFQF DTSPTPGSIV PATSSANITS EDRLNTTRPN KSINRRILQG HAIPFSDHSF 660 NTTEEQNDGL ESNKSSSSVV VSVLVDPREV GDGDGEGVIG SKTLPRIFVV VLIDSVKVAE 720 LIGLSVVTDD EKQKAGAALF PYLVCLMNGI DQDFFLQSYT CHSCWICTVM SKSNFALKTT 780 ELHNVFEEHI CKELSKVENL TSNNLKISES FAGERCVSWM IETYVDYNSE IYVMEAAKHT 840 N

Sequence ? help Back to Top

Protein Sequence Length: 841 aa Download sequence Send to blast

MEEPPPYYHR ENHLQDGDVG LSMPSLDPHF PLFPENGDDN DVFTTAAAAV DGDFLMNVDF  60
DFTFDDLSFA DNLLLEQPEP NSDSDLVVLS SDISQEWANP NSDESGCDPT RDGDVRVYEC  120
LPVSSEESNF RGKCDSPEIG SSKSNSGVYS GKSCDDNSVD HNNNNNNNSN NINGNDNENH  180
SVDHLKLGQK MIKVEHAKPS DQTTKDSCSS GSTVKCASKS KSKRKIEAEQ DHGSSETRVR  240
KFRRGNVSVI KKNDDENVDD DGDDDDDKRK ARLIRNRESA QLSRQRKKQY VEELEDKVRA  300
MHSTITDLNT KISYFMTENA SLRQQLSCAG SNGGGGVAGH GMPVHGVYPV QPMAPMAYPW  360
MVYPPAYMVK HQGSNVPLVP IPRLKPQQGV PSTKVKKSCE TRKEKEKKEK RKGDGKTKKV  420
ASVSLLGLLF FMLLCGGILP MVSVRYGSFG GRVDGVQKGA VFVVDKHAET EGYKQSNNSN  480
SGNGSEPLVA SLFVPRNDKL VKIDGNLIIH SVLASEKAMT SQSAKGPKTP EETGLAIHGS  540
YPPYPTPGPG SNNWRRPHLD RNQSGRQRAL GSGSADFTPI GSDGKLQQWF REGLAGPMLS  600
SGMCTEVFQF DTSPTPGSIV PATSSANITS EDRLNTTRPN KSINRRILQG HAIPFSDHSF  660
NTTEEQNDGL ESNKSSSSVV VSVLVDPREV GDGDGEGVIG SKTLPRIFVV VLIDSVKVAE  720
LIGLSVVTDD EKQKAGAALF PYLVCLMNGI DQDFFLQSYT CHSCWICTVM SKSNFALKTT  780
ELHNVFEEHI CKELSKVENL TSNNLKISES FAGERCVSWM IETYVDYNSE IYVMEAAKHT  840
N

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	401	408	RKEKEKKE

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator involved in salt and osmotic stress responses. Functions as a stress sensor and transducer in a signaling pathway that resembles an ER stress response. Following salt stress, BZIP17 is cleaved by SBT6.1 (S1P) and S2P at the C-terminus and the N-terminal bZIP component is translocated to the nucleus, where it activates the expression of salt stress response genes (PubMed:17662035). Functions as a stress sensor and transducer in ER stress signaling pathway. ER stress induces proteolysis of BZIP17 by SBT6.1 (S1P) and S2P, and the N-terminal bZIP component is translocated to the nucleus, where it activates the expression and production of ER chaperones, as well as protein involved in brassinosteroid (BR) signaling, which is required for stress acclimation and growth (PubMed:20876872). {ECO:0000269\|PubMed:17662035, ECO:0000269\|PubMed:20876872}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_021840232.1	0.0	bZIP transcription factor 17-like
Swissprot	O22208	1e-114	BZP17_ARATH; bZIP transcription factor 17
TrEMBL	A0A0K9QEM4	0.0	A0A0K9QEM4_SPIOL; Uncharacterized protein
STRING	XP_010673077.1	0.0	(Beta vulgaris)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G40950.1	2e-88	bZIP family protein

Publications ? help Back to Top
Zhou SF, et al. Membrane-associated transcription factor peptidase, site-2 protease, antagonizes ABA signaling in Arabidopsis. New Phytol., 2015. 208(1): p. 188-97 [PMID:25919792] Sagor GH, et al. The polyamine spermine induces the unfolded protein response via the MAPK cascade in Arabidopsis. Front Plant Sci, 2015. 6: p. 687 [PMID:26442007] Ezer D, et al. The G-Box Transcriptional Regulatory Code in Arabidopsis. Plant Physiol., 2017. 175(2): p. 628-640 [PMID:28864470] Kim JS,Yamaguchi-Shinozaki K,Shinozaki K ER-Anchored Transcription Factors bZIP17 and bZIP28 Regulate Root Elongation. Plant Physiol., 2018. 176(3): p. 2221-2230 [PMID:29367234] Cifuentes-Esquivel N, et al. bZIP17 regulates the expression of genes related to seed storage and germination, reducing seed susceptibility to osmotic stress. J. Cell. Biochem., 2018. 119(8): p. 6857-6868 [PMID:29693271] Guan P, et al. SENSITIVE TO SALT1, An Endoplasmic Reticulum-Localized Chaperone, Positively Regulates Salt Resistance. Plant Physiol., 2018. 178(3): p. 1390-1405 [PMID:30287478]