PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID DCAR_031047
Organism
Daucus carota
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
Family WRKY
Protein Properties Length: 771aa    MW: 84417.9 Da    PI: 8.1936
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
DCAR_031047genomeARS-USDAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY92.33.8e-29161219158
                  ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS CS
         WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnh 58 
                  ++Dg++WrKYGqK  kg+++pr+YYrCt++ +Cpv+k+v+r++ed +++ +tYeg+Hnh
  DCAR_031047 161 MNDGCQWRKYGQKIAKGNPCPRAYYRCTMStSCPVRKHVQRCQEDLSILLTTYEGSHNH 219
                  58***************************99**************************** PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.804.8E-30146222IPR003657WRKY domain
SuperFamilySSF1182903.27E-26155222IPR003657WRKY domain
PROSITE profilePS5081127.887156222IPR003657WRKY domain
SMARTSM007741.4E-34161221IPR003657WRKY domain
PfamPF031062.4E-25162219IPR003657WRKY domain
Gene3DG3DSA:3.10.580.105.2E-4489583No hitNo description
SuperFamilySSF546316.94E-7491584No hitNo description
PROSITE profilePS513717.111530593IPR000644CBS domain
SMARTSM0011645537586IPR000644CBS domain
Gene3DG3DSA:3.10.580.103.2E-19610743No hitNo description
PROSITE profilePS5137111.579610670IPR000644CBS domain
SuperFamilySSF546312.97E-23611752No hitNo description
PfamPF005711.8E-6612663IPR000644CBS domain
CDDcd046423.17E-37613742No hitNo description
SMARTSM001162.0E-6614663IPR000644CBS domain
PROSITE profilePS513719.778690751IPR000644CBS domain
SMARTSM001162.8E-4695744IPR000644CBS domain
PfamPF005714.1E-8695741IPR000644CBS domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0042802Molecular Functionidentical protein binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 771 aa     Download sequence    Send to blast
MATALQIRSK IKEEVALVPE IPKSKSSESP AQEMDETREE MDHIREDDLV ALCLGRSSLS  60
VAKNKDHLPK ASKQEDDSLN QGLVLRLDGR SYEYSGDQND AGVSKSQSPT KIEEESETDQ  120
KWGSSIGLKA ARSEEDEALL QQHPAKKARV AVRAICNGPT MNDGCQWRKY GQKIAKGNPC  180
PRAYYRCTMS TSCPVRKHVQ RCQEDLSILL TTYEGSHNHG LPPAATAMAS TTSAAVSMLK  240
TSSTSTSQPS LSLPSATSAT TKFPPFYAPN TTISTSQSHP TITLDLTTPS AYSHYNKYSS  300
TFLPPHHTTY SPAASLNFSA SSSSSSASFE HWRNQSISSS SYASLYNRTE LQLPLMPHKN  360
NFINQTQPQF SIEKIADATK EITSNPSFQS ALAAAISSIV GKKSGGIAET MQSQFATSHF  420
NSIFPQAGNL KFDFSPFASS KGIRVNMAQF QALNQVLQNP SSGAYFEMVQ KRKKLPMSLQ  480
ETLNKAFANI PVSTFPIVPG GKAADTLGDD FYKVLLEEEP FASTTVRSII TSYRWAPFIP  540
VAADSSMLGV LLLLSKYRLR NVPIIEDGKP TIKNFITQSA VVKGLDNCQG RDWFDCIAAQ  600
PITELGLPFM SNDEVISIKS SELVLEAFKL MKDNQIGGLP VIEGPEKNII GSLSIKDIRF  660
LLLNRELFAK FRELTVKDFM NTIASEARDL GKGTIPATCS LSSNLGSVIH ILASKMVHRV  720
YVVGANGKEV VGVITLRDII SCFIFEPPNY FENYLGLTSY EVKIDAFKTK *
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A6e-22148224176WRKY transcription factor 1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017225976.10.0PREDICTED: probable WRKY transcription factor 61
TrEMBLA0A175YK220.0A0A175YK22_DAUCS; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA777222
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G18860.14e-45WRKY DNA-binding protein 61