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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | DCAR_030478 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
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Family | bZIP | ||||||||
Protein Properties | Length: 144aa MW: 17229.4 Da PI: 9.841 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 32.1 | 2.4e-10 | 22 | 82 | 3 | 63 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 e+k+ +r+++NRe+ArrsR ++++ ++ L + + ++ +++ + +++ +++ + ++++ DCAR_030478 22 EDKKRKRMISNRESARRSRMKRQQHMQDLNNQIMFYKNRRTEINQSISNFTEQFTAIENQN 82 79*********************************99999999999999999888777665 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 1.7E-14 | 20 | 84 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF07716 | 2.1E-8 | 21 | 70 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.818 | 22 | 85 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 3.86E-10 | 24 | 75 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 5.4E-8 | 24 | 80 | No hit | No description |
CDD | cd14702 | 1.74E-10 | 25 | 54 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 27 | 42 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 144 aa Download sequence Send to blast |
MDHAKRPSSG SEEDDRYMMI TEDKKRKRMI SNRESARRSR MKRQQHMQDL NNQIMFYKNR 60 RTEINQSISN FTEQFTAIEN QNRIMRAQKE ELRKRLEAAE LVTSYLDAAK GYPVNTAEEP 120 WYYNLWQPSQ SMPIMTSAEF FQF* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 37 | 42 | RSRMKR |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_017223912.1 | 1e-103 | PREDICTED: bZIP transcription factor 53-like | ||||
TrEMBL | A0A175YH14 | 1e-102 | A0A175YH14_DAUCS; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA15128 | 7 | 8 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G62420.1 | 1e-24 | basic region/leucine zipper motif 53 |
Link Out ? help Back to Top | |
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Phytozome | DCAR_030478 |