PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

DCAR_029514

Organism

Daucus carota

Taxonomic ID

4039

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus

Family

Dof

Protein Properties

Length: 290aa MW: 31484.3 Da PI: 8.3286

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
DCAR_029514	genome	ARS-USDA	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	75.6	6.4e-24	8	66	2	60
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkk 60 e++l+cprCds++tkf y+nn +sqPry Ck+C++ Wt+GG +r++ g r+ ++ DCAR_029514 8 MEQNLRCPRCDSEETKFAYFNNNKTSQPRYRCKSCKKLWTHGGKVRDISSNGEERRVNR 66 57899*******************************************98777776554 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	2.0E-13	9	66	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	5.7E-25	10	65	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	21.492	12	66	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 290 aa Download sequence Send to blast
MANPSSEMEQ NLRCPRCDSE ETKFAYFNNN KTSQPRYRCK SCKKLWTHGG KVRDISSNGE 60 ERRVNRSRDS SPAIVSSAPP PPPLPSSMTS AGGIINETGR LNLTRPPPNH NQPPLKFVRM 120 DIQNLSIKPL EPPHDVGQNN IVQQNQQVLI ENYSQGFHAQ QTPSNPGNQS FLNTTHSSNY 180 IEPNINTFGN NPIGGFTGGP SGSWGWSSAP VHLYIEPTNA HTFGENNNGM GGPNSNPSGM 240 SSSAWSSSPP SYYIEPNNAW NNNNPMDGSA RDPSGSSSGA WSSRAWSSN*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_017224983.1	0.0	PREDICTED: dof zinc finger protein DOF4.3-like
TrEMBL	A0A175YFE9	0.0	A0A175YFE9_DAUCS; Uncharacterized protein

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G45610.1	4e-19	Dof family protein

Link Out ? help Back to Top
Phytozome	DCAR_029514