PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID DCAR_029095
Organism
Daucus carota
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
Family C2H2
Protein Properties Length: 137aa    MW: 15382.3 Da    PI: 10.275
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
DCAR_029095genomeARS-USDAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H215.35.6e-056486123
                 EEETTTTEEESSHHHHHHHHHHT CS
      zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                 y+C+ C+k F  +++L  H++ H
  DCAR_029095 64 YPCKFCTKEFYASYSLGGHQNAH 86
                 99******************988 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576671.75E-66291No hitNo description
Gene3DG3DSA:3.30.160.602.1E-46290IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
PROSITE profilePS5015711.0326491IPR007087Zinc finger, C2H2
PROSITE patternPS0002806686IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003676Molecular Functionnucleic acid binding
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 137 aa     Download sequence    Send to blast
MNNISFKTSF TDNILNNQQQ GSSIQTVKDA EAPREWLKLS LGGDLGPPVH DNSGLSTRTF  60
PRVYPCKFCT KEFYASYSLG GHQNAHKTER SEARRNKIQK LSFVQKPSRK RKSASNKDCG  120
RKEPSHAEEL DLNLKL*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1107112SRKRKS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017224799.18e-99PREDICTED: zinc finger protein 7-like
TrEMBLA0A175YF922e-97A0A175YF92_DAUCS; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80730.13e-13zinc-finger protein 1